Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1598 ATGTCGTTTCCACCTTCCAACAACAATACCCAGAACCAGAATCAGCATAATGCGATTATAAAGAACCCTAACCCTAACAATTTCCCAATTTCTTCTCCCACAAAGAAGAGAGCTTCAAGGTGGTCCGATATCTGGCTCAAGACCAACACCAACGCCAAGAATAATAATCCCCTCAACTCCATGGTCGTTGCTATGCAGCTTCACTCTCTATCTTCTTCCCCCAAACACCCGAAATCGATTCCCAATTTCTCAATCATGGACCGAACCCTACTCTTATCCGACGAGCTTCTTTTGAAGATCCTCGCCAAGCTTCCAGATTCTCAGAGGAACTCAAATTCCCTCGTTTGCAAGCGGTGGCTCAACCTCCAGGGTCGACTCGTTCGTTCCCTCAAGGTATTGGACTGGAACTTCCTCTTATCTGGTAGGTTGATTCACAGGTTCCCGAACCTAAATCACGTTGATTTGGTCTCTGGGTCTTTGATTTCTCCGAGAAATTCCGGAATTTGTTTGAGCCATCGTTATCTTTCCATGCATGTTGATTCTGCGTCTTCGCCAAGTTGGTGTTTTGGTGAGGAGAATTTGCTCCCTGTTGAGGTCATTGACAATGGCCTAATTGCTCTTGCCGGTGGCTGCCCCAATTTGCGCCGGCTTTCGGTGATCGGAGCCAGCGAGATGGGCCTGCTGAGTGTGGCTGAGGAGTGTTCCACATTGCAGGAGCTTGAGCTGCAGAGGTGCAGTGACAATGTACTTCGAGGGATCGCGGCTCGCGCGAATTTGCAGATCTTGAAACTTGTGGGGAATGTTGATGGTTTGTACACTTCAGTTGTGTCTGATATTGGGTTAACCATTTTGGCTCAGGGGTGTAAGAGGCTGGTGAAGCTTGAGCTTAGTGGGTGTGAAGGTAGCTTTGATGGGATCAAAGCCATTGGCAAGTGTTGCCAAATGTTGGAGGAGTTGACTTTTTGTGATCACAGGATGGATGATGGGTGGTTGGCAGCACTCTCATTTTGTGAGAATTTGAAGACATTGAGGTTCCAGTCTTGCAAACGGATCGATCATAATCCTGGTCTAGAGGAGTACTTGGGTTCTTGCGAGGCACTCGAACGGCTTCATTTGCACAAATGCCAGCTGCGCGACAAGAAGAGTGTTGCGGCCATGTTTTCCGTGTGCAGGGCTGCAAAGGAGATCATTATCCAGGATTGTTGGGGATTGGACAATACCATGTTTAGCTTCGCAAATGTTTGCAGGCGGGTAAAATTGTTGTACTTAGAAGGATGCTCAATGCTAACAAATGAAGGTTTGGAATCTGTAATCCATTCTTGGAAGGAGCTTCAGAGCCTTAAAGTAGTGTCATGTAAGAACATAAAGGACAGTGAAATCTCTCCTGAACTAGCAACCTTATTCACCACTCTCATAGATTTGAAATGGAGACCAGACACCAAATCACTTCTTCCATCAAGTCTTGCCGGAATAGGCATGGGTAAGAAAGGTGGTAAATTTTTCAGGAGGGTGTGA 1515 0.4667 MSFPPSNNNTQNQNQHNAIIKNPNPNNFPISSPTKKRASRWSDIWLKTNTNAKNNNPLNSMVVAMQLHSLSSSPKHPKSIPNFSIMDRTLLLSDELLLKILAKLPDSQRNSNSLVCKRWLNLQGRLVRSLKVLDWNFLLSGRLIHRFPNLNHVDLVSGSLISPRNSGICLSHRYLSMHVDSASSPSWCFGEENLLPVEVIDNGLIALAGGCPNLRRLSVIGASEMGLLSVAEECSTLQELELQRCSDNVLRGIAARANLQILKLVGNVDGLYTSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAALSFCENLKTLRFQSCKRIDHNPGLEEYLGSCEALERLHLHKCQLRDKKSVAAMFSVCRAAKEIIIQDCWGLDNTMFSFANVCRRVKLLYLEGCSMLTNEGLESVIHSWKELQSLKVVSCKNIKDSEISPELATLFTTLIDLKWRPDTKSLLPSSLAGIGMGKKGGKFFRRV* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1598 504 MobiDBLite consensus disorder prediction 1 35 - -
Amo13g1598 504 SUPERFAMILY RNI-like 133 268 - -
Amo13g1598 504 SMART LRR_CC_2 288 312 IPR006553 -
Amo13g1598 504 SMART LRR_CC_2 415 440 IPR006553 -
Amo13g1598 504 SMART LRR_CC_2 211 236 IPR006553 -
Amo13g1598 504 SMART LRR_CC_2 364 389 IPR006553 -
Amo13g1598 504 SUPERFAMILY RNI-like 276 459 - -
Amo13g1598 504 PANTHER F-BOX PLANT-LIKE PROTEIN 69 485 - -
Amo13g1598 504 Gene3D Ribonuclease Inhibitor 304 480 IPR032675 -
Amo13g1598 504 Gene3D Ribonuclease Inhibitor 86 303 IPR032675 -
Amo13g1598 504 SUPERFAMILY F-box domain 84 139 IPR036047 GO:0005515
Amo13g1598 504 PANTHER UNCHARACTERIZED 69 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1598 Amo-Chr13 21575443 21578039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1598 K10268 - gmx:100812193 707.983