Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1596 ATGTCTCTCAGTCCGATTTGGAGGTCAACTTATTCAAGAGATCTGGTTGTGCAGCTAATGGAGAGGCGGGGATATGGAGAAGAGTACATTAATCGTTATAAGATGATGACAAGGTTTCATCATCAAAGAGTTCCATTGGTAATCCTTGTTTGTGGAACTGCTTGTGTTGGGAAGTCTACTATCGCCACCCAGCTTGCGCAGAGGCTAAATTTACCAAATGTGTTGCAGACAGATATGGTTTACGAATTGTTGCGCACATCAACAGATGCACCATTGGCGTCAACTCCTGTATGGACGCGAGACTTTAATTCATCGGAGGAGTTAATAACTGAATTTTGCAGAGAATGCAGAGTTGTTCGCAAAGGTTTGGCTGGTGATTTGAAAAAGGCAATGAAGGATGGAAAGCCAATTATAATTGAGGGAATTCATTTGGACCCTAGCATTTATTTAGTAGACGATGAGAAATCACCTGCTGCTGTACAAGCTGAAAATAAAGGGATGAATTCAACATCTGCGGCACCAGACGATAGTGCTACAGTTCAAACGGAAAATACTAATGAAGGTAGTCATGATGAGAATCATGGTGGTTCCAGGACTCTGAGTTCAACTGAAGGAATATCTATGGACCAAGTTGATGCAGTATCAAATAATGTCGCATCCATTAATCTAAGGCAGACAAAAAAAATTGTTACTAAAAAGTCAGGTCCTAAGCCAATAATTGTGCCTATTGTTCTGAAGATGGCTGAATTTGATCATAAGGCATTACTTGAGGAGTGGATCTGCTCTCGCACATTTACCGAGAAATGCCCAGACAAGGATAAAGATAAGCTTATAGCAAATTTGAAAACCATACAAGATTACCTGTGCTCTTTCACTTCACAAGGGTTGACTGTAGTGAATGTATCAGCAACAACATTTCCTCAAACATTGGATTGGCTCCATAATCACCTTCTTCAGTAA 960 0.4042 MSLSPIWRSTYSRDLVVQLMERRGYGEEYINRYKMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLASTPVWTRDFNSSEELITEFCRECRVVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLVDDEKSPAAVQAENKGMNSTSAAPDDSATVQTENTNEGSHDENHGGSRTLSSTEGISMDQVDAVSNNVASINLRQTKKIVTKKSGPKPIIVPIVLKMAEFDHKALLEEWICSRTFTEKCPDKDKDKLIANLKTIQDYLCSFTSQGLTVVNVSATTFPQTLDWLHNHLLQ* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1596 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 150 IPR027417 -
Amo13g1596 319 Gene3D - 47 161 IPR027417 -
Amo13g1596 319 MobiDBLite consensus disorder prediction 160 202 - -
Amo13g1596 319 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 231 319 - -
Amo13g1596 319 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 17 173 - -
Amo13g1596 319 Pfam AAA domain 48 155 - -
Amo13g1596 319 MobiDBLite consensus disorder prediction 162 186 - -
Amo13g1596 319 PANTHER - 231 319 - -
Amo13g1596 319 PANTHER - 17 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1596 Amo-Chr13 21547245 21552016 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1596 - - adu:107495571 583.948