Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1592 ATGCATCCTTTGGGTTCTTCCCCATCATCATGTTTTGTAGCATTAGGTTTAGTTGTAGGTTTTTTGGTTCTAAATGTGGCGGTGTTGTGCAATGGAGGTTCAACAAGCTCCTTTGTTAGAAAAGAGGAGAAGACTGAGGATATGCCACTTGATAGTGATGTCTTTGCTGTTCCTCCTGGTCATAATGCTCCCCAACAGGTTCATATAACACAAGGTGATCTTGAGGGGAAGGCAGTGATTGTGTCATGGGTGACAATGGATGAAAAAGGGTCAAACCAAGTTCGTTATTGGAGTGAAAAAGACAAAAGCAAACCAAAGGTTTCTAATGGAAAAGTTGTTACTTATAAATATCACACTTACAAGTCTGGTTATATTCATCATTGCACCATCAAAAAATTGGAGCACAACACCAAATATTACTATGAGGTTGGAACTGGAAAATCAGCACGTCAATTTTGGTTTATGACTCCTCCAGAAGTTGGTCCTGATGTGCCATACACATTTGGGGTCATGGGGGATCTTGGACAGACTTATGATTCAAATGCAACACTTACTCACTATGAAAATAGCCCAAGTAAAGGACAAGCTGTTTTATATGTTGGAGATCTGTCTTATGCTGATAACCACCCTAATCATGATAACGTTAGATGGGATACTTGGGGAAGGTTTGCTGAAAGAGTTGTTGCTTATCAACCTTGGATTTGGACTACTGGCAACCATGAACTTGATTTTGCTCCTGAAATTGGTGAAAACATTCCTTTCAAGCCATTCACCCATCGTTACCATGTTCCTTATAAAGCATCAAATAGCACTCAACCCTTTTGGTATTCAATCAAGAGAGCTTCAGCATACGTTATTGTCTTGTCTTCATATTCGGCATATGGAACATATACACCTCAATACCAATGGCTATTAGAGGAGCTACCAAAAGTTAACAGGTCAGAGACTCCATGGTTGATTGTTCTTGTACATTCACCTTGGTACAACAGCAACCAGTATCACTACATGGAAGCCGAAACAATGAGAGTAATGTTTGAACCATGGTTAGTAGAGAACAAAGTTGATGTCGTATTTGCCGGCCATGTTCATGCCTATGAACGATCTGAACGAATCTCGAATATTGCTTACAATATTCTAAACAAAAACTGCACACCAGTAAGAGATCAATCAGCTCCAGTATACATAAACATTGGTGATGGAGGGAATGTTGAAGGCTTAGCAATCAACATGACAGAACCACAGCCAGATTACTCAGCACACAGGGAGGCTAGCTTTGGACACGCCATTTTCGACATAAAGAACAAGACACATGCTCGCTATAGCTGGCATAGGAATCAAGATGGATATGCAGTGGAAGCTGATTCTATGTGGTTTTACAATAGATTTTGGCACCCTCTTGATGATTCCACTACTAAGAAAGCTTCTCAGTAA 1431 0.4025 MHPLGSSPSSCFVALGLVVGFLVLNVAVLCNGGSTSSFVRKEEKTEDMPLDSDVFAVPPGHNAPQQVHITQGDLEGKAVIVSWVTMDEKGSNQVRYWSEKDKSKPKVSNGKVVTYKYHTYKSGYIHHCTIKKLEHNTKYYYEVGTGKSARQFWFMTPPEVGPDVPYTFGVMGDLGQTYDSNATLTHYENSPSKGQAVLYVGDLSYADNHPNHDNVRWDTWGRFAERVVAYQPWIWTTGNHELDFAPEIGENIPFKPFTHRYHVPYKASNSTQPFWYSIKRASAYVIVLSSYSAYGTYTPQYQWLLEELPKVNRSETPWLIVLVHSPWYNSNQYHYMEAETMRVMFEPWLVENKVDVVFAGHVHAYERSERISNIAYNILNKNCTPVRDQSAPVYINIGDGGNVEGLAINMTEPQPDYSAHREASFGHAIFDIKNKTHARYSWHRNQDGYAVEADSMWFYNRFWHPLDDSTTKKASQ* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1592 476 Gene3D - 63 160 - -
Amo13g1592 476 SUPERFAMILY Purple acid phosphatase, N-terminal domain 47 158 IPR008963 GO:0003993|GO:0046872
Amo13g1592 476 SUPERFAMILY Metallo-dependent phosphatases 162 468 IPR029052 -
Amo13g1592 476 CDD MPP_PAPs 162 460 IPR041792 -
Amo13g1592 476 Gene3D - 161 470 IPR029052 -
Amo13g1592 476 Pfam Calcineurin-like phosphoesterase 167 365 IPR004843 GO:0016787
Amo13g1592 476 PANTHER ACID PHOSPHATASE RELATED 17 472 IPR039331 GO:0003993
Amo13g1592 476 Pfam Purple acid Phosphatase, N-terminal domain 64 153 IPR015914 GO:0003993|GO:0046872
Amo13g1592 476 Pfam Iron/zinc purple acid phosphatase-like protein C 391 450 IPR025733 -
Amo13g1592 476 PANTHER PURPLE ACID PHOSPHATASE 17 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1592 Amo-Chr13 21473139 21476981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1592 62 448 Miscellaneous Gene Families AT2G03450 26.211 6.61e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1592 K22390 - pop:7461240 800.431