Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1582 ATGCCACATTCATCACGGGTCTTCCCCACACTGCAAAAAATGAGTTCAGTGGGTTTCAAAGTTTTGGTTTTTGGATTGGTTCTTGTGAGTGTGGCAGTGTTGTGTAATGGAGGATCAACAAGCACCTTCGTTAGAAATGAAGAGAAGGCTGTAGATATGCCACTTGATAGTGATGTCTTTGCTGTTCCTCCTGGTTATAATGCTCCCCAGCAGGTTCATATAACACAAGGTGATCACGACGGGAAAGCAGTGATTGTGTCGTGGGTGACTGTGGATGAACCAGGCTCCAGCATAGTGCAATACTGGAGCGAAAACAGCGAGCAAAAGAAGCTTGCTAAGGGAAGACATGTTACTTATAGATACTTCAATTACTCATCTGGTTTTATTCATCATTGCACCATCAGAAATTTGGAGTACAACACCAAATACTACTATGAAGTTGGAATCGCAAACACAACGAGGCAATTTTGGTTTGTGACTCCTCCTCAAGTTGGTCCTGATGTGCCATACACTTTTGGTCTCATTGGGGATCTTGGTCAGAGTTATGATTCAAATAAAACACTCACTCACTATGAAAAGAGCCCAAGTAAAGGACAAACTGTGTTGTTTGTTGGAGACCTTTCTTATGCGGATAATTACCCTAATCACGATAACGTTAGATGGGATACTTGGGGAAGGTTTGTAGAAAGGAGTACTGCTTATCAACCATGGATTTGGGTTGCAGGCAACCATGAAATTGATTTTGCTCCAGAAATCGGTGAAAGTGTACCTTTCAAGCCGTATCGCCATCGCTATCATGTTCCTTATAGAGCGTCGCAGAGTACCGCACCCTTCTGGTATTCTGTCAAGAGAGCCTCGGCACACATCATTGTGTTGGCCTCATATTCAGCATATGGGAAATATACACCACAATACAAATGGCTTGAACAGGAGCTACCAAAAGTTAACAGGACAGAGACTCCATGGTTGATTGTGCTTATGCATTCACCTTGGTATAACAGCTACAACTATCACTATATGGAAGGTGAATCAATGAGAGTAATGTATGAACCCTGGTTTGTGAAGTACAAGGTTGATGTCGTGTTTGCAGGGCATGTTCATGCCTATGAACGATCCGAACGTGTCTCAAATATTGCTTACAACATTGTGAACGGTATTTGCGTTCCTGTGAAAGATCAATCGGCTCCTGTATATATAACCATTGGTGATGGAGGAAACCTTGAAGGCTTGGCAACCAACATGACAGAACCACAGCCGGCGTACTCAGCATACAGAGAGGCTAGCTTTGGACACGCCATATTCGACATAAAGAACCGAACACATGCTCACTATGGCTGGCATCGGAATCAAGATGGATATGCCGTGGAAGCTGACAGCATGTGGTTTTTCAACAGATTCTGGCACGCAGATGATGATTCCACAACTCATAGTTCTCATTAA 1440 0.4333 MPHSSRVFPTLQKMSSVGFKVLVFGLVLVSVAVLCNGGSTSTFVRNEEKAVDMPLDSDVFAVPPGYNAPQQVHITQGDHDGKAVIVSWVTVDEPGSSIVQYWSENSEQKKLAKGRHVTYRYFNYSSGFIHHCTIRNLEYNTKYYYEVGIANTTRQFWFVTPPQVGPDVPYTFGLIGDLGQSYDSNKTLTHYEKSPSKGQTVLFVGDLSYADNYPNHDNVRWDTWGRFVERSTAYQPWIWVAGNHEIDFAPEIGESVPFKPYRHRYHVPYRASQSTAPFWYSVKRASAHIIVLASYSAYGKYTPQYKWLEQELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGESMRVMYEPWFVKYKVDVVFAGHVHAYERSERVSNIAYNIVNGICVPVKDQSAPVYITIGDGGNLEGLATNMTEPQPAYSAYREASFGHAIFDIKNRTHAHYGWHRNQDGYAVEADSMWFFNRFWHADDDSTTHSSH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1582 479 Pfam Calcineurin-like phosphoesterase 171 369 IPR004843 GO:0016787
Amo13g1582 479 Pfam Purple acid Phosphatase, N-terminal domain 69 159 IPR015914 GO:0003993|GO:0046872
Amo13g1582 479 Gene3D - 165 474 IPR029052 -
Amo13g1582 479 PANTHER ACID PHOSPHATASE RELATED 15 476 IPR039331 GO:0003993
Amo13g1582 479 CDD MPP_PAPs 166 464 IPR041792 -
Amo13g1582 479 Gene3D - 68 164 - -
Amo13g1582 479 SUPERFAMILY Purple acid phosphatase, N-terminal domain 50 162 IPR008963 GO:0003993|GO:0046872
Amo13g1582 479 ProSiteProfiles Fibronectin type-III domain profile. 68 163 IPR003961 GO:0005515
Amo13g1582 479 CDD FN3 67 147 IPR003961 GO:0005515
Amo13g1582 479 PANTHER PURPLE ACID PHOSPHATASE 15 476 - -
Amo13g1582 479 SUPERFAMILY Metallo-dependent phosphatases 166 469 IPR029052 -
Amo13g1582 479 Pfam Iron/zinc purple acid phosphatase-like protein C 395 454 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1582 Amo-Chr13 21363190 21366414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1582 127 452 Miscellaneous Gene Families AT1G13900 27.540 2.78e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1582 K22390 - gmx:100807555 865.144