Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1559 ATGATGAAGTTTGCAGGGTACTCCTTGGGAGTTTCATTTGCTCCCATAGGCTCAAATGTCTTTGCAAAAAGTTTCAGATTCCCAATAGTTGGTAGCATATATCGTGGGAATTTGCGAAGTTCAAGGTTGTTTTCTGCTTCTTGTTGGAGAGAACAATCAAATGGAAAAAATGGGGTGGTTGCAAAACAGTATCTTCCACCTTGGTTTAGTGTTGCTCCAATGATGGATTGGACGGATAATCACTATAGGACTCTAGCACGCCTCATATCGAAGCATGCTTGGCTCTACACTGAGATGATTGCAGCTGAAACGATTGTTCATCAAAAGGACAACCTGGACAGGTTCTTGGCATATTCTCCAGATCAGCATCCCATTGTGCTTCAAATCGGAGGGTATATAGAAAATTTGGCAAAAGCAACTGAACTTGCTAATGCTTATTGCTATGATGAGATCAATTTAAACTGTGGATGCCCTAGTCCAAGGGTAGCTGGACATGGATGCTTTGGCGTGAGCCTTATGCTTGACCCAAAGTTTGTTGCTGAAGCTATGTCGGCAATTGCTGCCAACACAAATGTACCTGTTAGTGTCAAATGTCGCATTGGAGTGGATGATCATGATTCCTATGATCAGCTATGTGATTTCATTTACAATGTTTCGTCTTTCTCTCCCACTAAGCATTTCATAATTCACTCAAGGAAGGCATTGCTCAATGGCATTAGCCCAGCTGAAAATCGGAATATTCCTCCACTAAAATATGAATATTTTTATGGCCTCTTACGTGATTTTCCTGACTTAACATTTACAATCAATGGTGGCATTTCTGGTATTGATGAGGTCAATGCAGCTCGAGAAGCTGGTGCTCATGGTGTTATGCTTGGACGTGCAGCATACAATAATCCATGGCATATTTTGGGACATGTTGATACTGCAATTTATGGTGCACCACGCAGTGGTCTCACACGTCGTCAGGTACTCAAAAAATATCAAGTCTATGGAGATTCTGTGTTGGGAAAATATGGGCACAAGCCAACTGTGCGAGATATTGTGAAGCCTTTGCTCAATCTTTTCCATTCAGCACCTGGAAATGGACTTTGGAAGCGCAAAGCAGATGCTGCTTTCCGAAGTTGCACGACAATTGAATCATTTTTTGAAGAAACCCTTGTAGCAATTCCTGACTTGGTATTGGATTCGTCTGCTGTGGAACCACCGCCTGGCCGTGGTGATCTTTTTGCCAACATAGATAGTTTACTGCCTCCTCCTTACAGAACAAGAGAAGAAGAGATCGTTTTATGCGCTTAG 1299 0.4234 MMKFAGYSLGVSFAPIGSNVFAKSFRFPIVGSIYRGNLRSSRLFSASCWREQSNGKNGVVAKQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMIAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGYIENLAKATELANAYCYDEINLNCGCPSPRVAGHGCFGVSLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDQLCDFIYNVSSFSPTKHFIIHSRKALLNGISPAENRNIPPLKYEYFYGLLRDFPDLTFTINGGISGIDEVNAAREAGAHGVMLGRAAYNNPWHILGHVDTAIYGAPRSGLTRRQVLKKYQVYGDSVLGKYGHKPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFRSCTTIESFFEETLVAIPDLVLDSSAVEPPPGRGDLFANIDSLLPPPYRTREEEIVLCA* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1559 432 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 60 429 IPR004653 GO:0002943|GO:0017150
Amo13g1559 432 Pfam Dihydrouridine synthase (Dus) 71 375 IPR035587 -
Amo13g1559 432 CDD DUS_like_FMN 69 301 IPR035587 -
Amo13g1559 432 SUPERFAMILY FMN-linked oxidoreductases 68 368 - -
Amo13g1559 432 Gene3D - 313 379 - -
Amo13g1559 432 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 60 429 - -
Amo13g1559 432 Gene3D Aldolase class I 65 306 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1559 Amo-Chr13 21126703 21130505 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1559 K05539 - gmx:100779457 720.694