Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1460 ATGAATATTATTGCGTTCCTTAGAAGCTTCACGATCTTGTTCCTTAGTTGTGTAACCATTATTACTAGGTTTGATTGGTGCTTTTCAAGCATCACAGCTTCTTCTTTTTCTTTGAATGCAGTTGGTGGTGGACACTTCAGTTTTGACGAAACTAGCCTCAGAAATGCAGCTAAAGACTTTGGAAACAGGTTCCAATACCAACCAATGGCAGTTATGAATCCAGAATCAGTTTCTGACATTGCCAACACCATCAAGCATGTGTGGCTCATGGGACCCACTTCTCACCTAACTGTTGCTGCAAGAGGCCATGCCCACTCTCTCCAAGGTCAGGCTCAAGCTCCCAATGGAATTGTCATCAACATGGAATCTCTTAAGCTACCTGGAATGCAGCTACATCTAGGACCAGATTCTGATTCGGATTCAGATTCCGATTCTGATTCTGATTCTCCTTATGTTGATGTTTCCGGTGGTGAGTTGTGGATAAACATCTTGCATGAGACTCTTAGGTTTGGTTTAACACCGAGATCATGGACGGACTATTTACATCTTACCGTTGGCGGCACGCTCTCCAACGCCGGCGTAAGCGGCCAGGCGTTCCGCCACGGTCCTCAGATCAGTAATGTTCAGCAGCTTGAGATTGTTACAGGAACAGGGCAAGTGGTAAACTGCTCCAAGGATGAGAATGGTGAACTGTTTCACAGTGTGTTAGGGGGTCTTGGGCAGTTTGGCATTATAACAAGGGCAAGAATTTTACTTGAACCAGCACCTACCATGGTGAAATGGATCAGAGTGTTGTATTCAGATTTCACAGCATTCACAAGAGACCAAGAGAAACTGATATCTTCAGAGAACAATAATGCATTTGATTACATTGAAGGTTTTGTGATAATAAACAGAACTGGTCTCCTAAATAATTGGAGATCAACCTTTAATCCTCAAGATCCAATTCAAGCTAATCAGTTCAAGTCAGATGGAAGAACCCTCTTCTGCCTAGAATTAGCCAAGTATTTCAATCCACAAGATATCGATTTCGTAAACGAGGAAGTTGAGAAGCATTTGTCTTATCTGCACTATATTGAATCAACACTGTTCCTAACAGAAGTAACATATGTAGAGTTCTTAGACAGAGTGCATGTATCAGAGTTGAAGCTGCGTTCAAAAGGGTTGTGGGATGTTCCACACCCATGGCTCAATCTCTTTGTACCAAGAAGCAATATACACAAGTTTGCACAAGTTGTCTTTGGGAATATCCTAACTGAAACCAGCAATGGCCCTGTCCTTATCTATCCAGTAAATAAATCAAAGTGGGACAATAGAAGCTCAGTTGTGACACCAGATGAAGAAGTGTTTTACTTAGTGGGAATTTTAGCATCTGCAGTGGGAGATTCAAGTGGAAATGATGGGATAGAGCACATAGAAGGTGAGAACAGAAGGATATTGGAGTACTGTGAAAGAAACAATCTTGGAGTGAAGCAGTACTTGCCCCACTATAACACACAGGAGGAATGGAAGGCCCACTTTGGTCCAAAGTGGGAGTCTTTTCTGCAAAGAAAATCTGTTTATGACCCTTTGGCTATTCTGGCTCCAGGCCAAAGAATATTTCAAAAAGCAATAAACTTCTCATGA 1626 0.4213 MNIIAFLRSFTILFLSCVTIITRFDWCFSSITASSFSLNAVGGGHFSFDETSLRNAAKDFGNRFQYQPMAVMNPESVSDIANTIKHVWLMGPTSHLTVAARGHAHSLQGQAQAPNGIVINMESLKLPGMQLHLGPDSDSDSDSDSDSDSPYVDVSGGELWINILHETLRFGLTPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQISNVQQLEIVTGTGQVVNCSKDENGELFHSVLGGLGQFGIITRARILLEPAPTMVKWIRVLYSDFTAFTRDQEKLISSENNNAFDYIEGFVIINRTGLLNNWRSTFNPQDPIQANQFKSDGRTLFCLELAKYFNPQDIDFVNEEVEKHLSYLHYIESTLFLTEVTYVEFLDRVHVSELKLRSKGLWDVPHPWLNLFVPRSNIHKFAQVVFGNILTETSNGPVLIYPVNKSKWDNRSSVVTPDEEVFYLVGILASAVGDSSGNDGIEHIEGENRRILEYCERNNLGVKQYLPHYNTQEEWKAHFGPKWESFLQRKSVYDPLAILAPGQRIFQKAINFS* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1460 541 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 256 534 IPR015345 GO:0009690|GO:0019139|GO:0050660
Amo13g1460 541 SUPERFAMILY FAD-linked oxidases, C-terminal domain 256 534 IPR016164 GO:0003824|GO:0050660
Amo13g1460 541 SUPERFAMILY FAD-binding/transporter-associated domain-like 41 254 IPR036318 GO:0050660
Amo13g1460 541 Gene3D - 258 493 IPR016170 -
Amo13g1460 541 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 4 538 - -
Amo13g1460 541 MobiDBLite consensus disorder prediction 130 151 - -
Amo13g1460 541 Gene3D - 121 257 IPR016169 -
Amo13g1460 541 Gene3D - 54 534 IPR016167 -
Amo13g1460 541 PANTHER GULONOLACTONE OXIDASE 4 538 - -
Amo13g1460 541 Pfam FAD binding domain 68 224 IPR006094 GO:0050660
Amo13g1460 541 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 68 103 IPR006093 GO:0016491
Amo13g1460 541 ProSiteProfiles PCMH-type FAD-binding domain profile. 64 255 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1460 Amo-Chr13 19536000 19538803 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1460 K00279 - gmx:100808619 851.662