Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1439 ATGGCGTCCTCTCTTGCAGTGAAGCGTTTCCTCTCCTCTCCCCTCATTTCCAAGTCTTTGCTTCGTCCAGCTGCTGCTTCCGCTTCCCGCTCCTTCAACACCAATGCCATGCGCAACTACGACGACTCCGCAGATGACCGCAACCTCGACGTCGACCGTCGCTCCGATCGCACTCTCCCTCGCACTCCTCGCCGCGACGATTTCCTCTCAGATGTGTTCGATCCATTTTCTCCGACTAGGAGCTTGAGCCAGGTTCTGAATATGATGGATCAGTTCATGGAGAATCCGTTCCTCTCTGCTTCTCGTGGAGCGGGAGCTGGACTTCGTCGTGGTTGGGACGCGCGTGAGACGGAAGATGCACTGCTTCTGCGCGTGGACATGCCTGGTCTCGGAAAGGAGGATGTCAAAGTTTCCGTGGAGCAGAACACCCTGACCATAAGAGGTGAAGGTGGTAAAGAAGGCGAAGACGAAGAAAGCGCGCGTAGGTACACCGGGAGGATCGACTTACCTGATAGGCTTTTCAAGATTGACCAGATCAAAGCTGAGATGAAGAACGGCGTGCTTAAGGTCGTTGTGCCTAAGATGAAGGAGGAAGAGAGGAGTGACGTGTTCAGTGTCAAGGTTGATTAG 630 0.5413 MASSLAVKRFLSSPLISKSLLRPAAASASRSFNTNAMRNYDDSADDRNLDVDRRSDRTLPRTPRRDDFLSDVFDPFSPTRSLSQVLNMMDQFMENPFLSASRGAGAGLRRGWDARETEDALLLRVDMPGLGKEDVKVSVEQNTLTIRGEGGKEGEDEESARRYTGRIDLPDRLFKIDQIKAEMKNGVLKVVVPKMKEEERSDVFSVKVD* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1439 209 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 103 209 IPR002068 -
Amo13g1439 209 MobiDBLite consensus disorder prediction 36 70 - -
Amo13g1439 209 CDD ACD_sHsps-like 113 194 - -
Amo13g1439 209 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 208 IPR044656 -
Amo13g1439 209 Pfam Hsp20/alpha crystallin family 114 208 IPR002068 -
Amo13g1439 209 MobiDBLite consensus disorder prediction 40 70 - -
Amo13g1439 209 SUPERFAMILY HSP20-like chaperones 78 199 IPR008978 -
Amo13g1439 209 Gene3D - 68 208 IPR008978 -
Amo13g1439 209 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1439 Amo-Chr13 19360181 19361708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1439 K13993 - gmx:547852 291.967