Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1375 GAGAAAAAGAGAGAATCAAAGGGGGAAATGGCTGAGAGTGTGAGAGAATCAATAAAAGAACAAATCTCTATGTTTGATGAGAAAATGATAAGTGCTCAAAGGGCTGCTAGGAGGGAAAACTGGAGGGAATTCAAGAAAAATTTTGAAGAAGATAGGATGCGATTACTTGAACCGCTTGACTTATTTGGGAACACTGCCATCCACATTGCGACTCACTCCAATAGTCCAAATCTCTTGCAGGAACTTCTGGAGATGCTTCCTCGACAAGAAAGGTGGCGCGCGATGAGAATGGGGAATTGCGTCAATAACACCCTTCTGCATGAGATTATCTTTTGCACAACGGTCGAAATGGCTGGTGTTGTGTTCAAGTTGGAGAAGGAGCTGCAGCAAGAAGAACCATATGAGCCCCTTGTAGAGGTAAGAAATGATTCTGGTGAATCCCCTCTGTTCAGGGCTGCTAAGCTTGGAAAGCTGAAGATGCTCAAGTATATGGCAAAACATGTGGTTGGTGACATAAGAAGTCATTTTGTAAGATTTGATAGATGTTCCATTCTTCACGCTTGCATTCTTGGTCAATTCTTTGATGTTGCTATTTGGTTATTGAAATTGGATGGAAATTTGGCTCAACACAAGGATATGGATGGGTTGACATGTCTTCAACTTCTTGCCAACATGCCTCTTGTTTTTCGGAGCCAAACCCCCTCAATGGGAGCAGTGAAGAACCTTATGTATTATTGTACAGTCCTATTTCCCCATTTCTACATTCAATTTTCCAACATTGGCATAATTGTTTACCTTTATTATAATTTGGTTGACGCAGTGCTTCCAGACGAAGGATATGAAATTGATGATGATTATGATGAGAAGGGGGAGGAGGAAGAGAGTGTTGTGTTCAGACAGAAAACAGATCTAGAAAGTGGTCCACTGGATGAGGCAAAGCAACCCGTTCATCAATTTGCTGCTTTTTCAAGGATCAACTATTCTATATGGAAAATTCTGGCCAAAGAGTTCAATGGGATTGGACATATTTGGCAAAAGAAGAAACAACACAAGTTAGCAGAGTGTCTGGCCGAGTTGTTAGTGCAGAAGGACTTCTCATGGCAGATTTCTTTTCATTCAAATTTTCAACCATTGATTGTGTTGCCAATTCTTTCCTCCAAACTAGACAGAATAAAAGAAATTCAGCTGATGAAGGAGAAACGCCAGTTAGTTGAAATAGCTCATTCTAGAATCAGCAAACCTTTGCTCAAGGAATCCATTTCCGAAGCATCCCATTTTAAAAACTACACACCTCTTCTCATGGCAGCCGGTTCGGGAATCGTAGAAATTGTTGAAAAAATCATTGACATGAATCCTGAGGCTATTAGTCATGTTAGCCAGGATGAACACAATGTTCTACACATGGCTGTGAAGCACCGGCAGCTTAAAATCTTCAATCTGATAAAGAGAAATTCTGCATTCAAATCATTGATACACAGGATAACCGGGGAAGGTCGCACTCTCTTGCACCAAGTTGCTAGAATGGAGTTTTACAAAGAGCAACGGCTCCCTGGTGTGGCGTTCCAACTGCAAGACGAGTTGCGTTGGTACGAAAGAGTGAGAAGGATTGTTCCTCCTCACTACTTAATGCATTGTGACAAAGACGGCCTAACTGCAAAAGATGTTTTGGAAATGGAGCATCAGGATATGCACAAAGAGGCAAAGTCCTGGATAAAGGAGACAGCTCAATCATGCTCCACCGTAGCAGTTCTCGTTGCCACAGTTGTCTTTGCCGCAGCCTATACAATCCCAGGTGGGAGCCAAAACGGCACGCCAGTGTTCTTCGGCTCACGAGTCTTCCTCTTCTTCACTATCACTGATGTTGTGGCCCTTGTGAGCTCACTTGCCTCAGTGGTGATGTTCCTTTCAATCCTGACATCGCCGTTCGAGCTATGGGATTTCTACAAGTCCCTCCCAAGAAAGCTCAGCCTGGGATTTGCATTGCTGTTCTTCTCATTGGTGTGCACAATGCTGGCATTCAGCGCAACCGTTTTGCTGACGATTCGGTTGGATAACAAGGAATGGACTTCTATTTTGTTCTATTGTGCTGGATTCCTTCCTGTGGCTATATTTGCATGGATGCAATTCCCACTCTATAAGACTCTTCAAAAATTAGTTAGGAGGCTTTGCAACGGTGTTAAGCAGTTGGTGCCAACTACATTGATCAATTGTTTCAAAAGACACAAAAGATATTAA 2235 0.426 EKKRESKGEMAESVRESIKEQISMFDEKMISAQRAARRENWREFKKNFEEDRMRLLEPLDLFGNTAIHIATHSNSPNLLQELLEMLPRQERWRAMRMGNCVNNTLLHEIIFCTTVEMAGVVFKLEKELQQEEPYEPLVEVRNDSGESPLFRAAKLGKLKMLKYMAKHVVGDIRSHFVRFDRCSILHACILGQFFDVAIWLLKLDGNLAQHKDMDGLTCLQLLANMPLVFRSQTPSMGAVKNLMYYCTVLFPHFYIQFSNIGIIVYLYYNLVDAVLPDEGYEIDDDYDEKGEEEESVVFRQKTDLESGPLDEAKQPVHQFAAFSRINYSIWKILAKEFNGIGHIWQKKKQHKLAECLAELLVQKDFSWQISFHSNFQPLIVLPILSSKLDRIKEIQLMKEKRQLVEIAHSRISKPLLKESISEASHFKNYTPLLMAAGSGIVEIVEKIIDMNPEAISHVSQDEHNVLHMAVKHRQLKIFNLIKRNSAFKSLIHRITGEGRTLLHQVARMEFYKEQRLPGVAFQLQDELRWYERVRRIVPPHYLMHCDKDGLTAKDVLEMEHQDMHKEAKSWIKETAQSCSTVAVLVATVVFAAAYTIPGGSQNGTPVFFGSRVFLFFTITDVVALVSSLASVVMFLSILTSPFELWDFYKSLPRKLSLGFALLFFSLVCTMLAFSATVLLTIRLDNKEWTSILFYCAGFLPVAIFAWMQFPLYKTLQKLVRRLCNGVKQLVPTTLINCFKRHKRY* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1375 744 PANTHER CASKIN 48 716 - -
Amo13g1375 744 Gene3D - 1 227 IPR036770 -
Amo13g1375 744 SMART ANK_2a 144 174 IPR002110 GO:0005515
Amo13g1375 744 SMART ANK_2a 62 91 IPR002110 GO:0005515
Amo13g1375 744 SMART ANK_2a 461 490 IPR002110 GO:0005515
Amo13g1375 744 SMART ANK_2a 427 457 IPR002110 GO:0005515
Amo13g1375 744 SMART ANK_2a 180 209 IPR002110 GO:0005515
Amo13g1375 744 Pfam Domain of unknown function 569 678 IPR026961 -
Amo13g1375 744 Gene3D - 390 511 IPR036770 -
Amo13g1375 744 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 48 716 - -
Amo13g1375 744 SUPERFAMILY Ankyrin repeat 35 509 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1375 Amo-Chr13 18272440 18275292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1375 278 714 Miscellaneous Gene Families AT3G12360 24.895 1.27e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1375 - - gmx:100811106 958.362