Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1370 ATGGCGACTCTGCGTTTCACTGACTGCTCCAACCTCACCTCCACCTTCTTCAGGCCTTCCTTACCCTCTCTCTACGCCGCAAAGTCTCGCCATTCCCAAAACCCTCAGAATCGGAACACCAGCACCGGCAGCTGCACCTTCGTTCCCAGAGCTTCTCTTCAGCCGCACCAGGACGATCAATTCTCTCTCTCCCGGAGACGTTTCATCGCCGACACTGCCGCCGTCTCGCTCTCGATTCCTCAGCTCGTTGGATTTGAACAGGCTGCGAGGTCGGAGGAAGCGCTGTCGGAGTGGGAGAGAGTTTACCTCCCTATCGATCCCGGCGTCGTGCTCCTTGACATTGCGTTTGTTCCCGATGATCCCAACCACGGTTTCCTTTTGGGGACTAGGCAAACCATTATGGAGACAAAAGATGGTGGAAACACTTGGGCTCCCCGTTCGATACCCTCTGCAGAGGATGAAGATTTTAATTATAGATTTAATTCCATCAGCTTCAAAGGGAAGGAAGGGTGGATAGTTGGAAAGCCTGCAATTCTATTATATACTTCTGATGCTGGAGAAAGTTGGGAAAGGATACCACTTAGTGCTCAACTTCCAGGCGATATGGTATATATAAAGGCAACCGGTGAAAAGAGTGCAGAGATGGTGACTGACGAAGGTGCAATCTACGTTACATCAAACAGAGGCTACAATTGGAAGGCTGCTGTTCAGGAAACTGTGTCAGCTACTCTTAATCGAACAGTCTCTAGTGGTATTAGTGGTGCAAGTTATTACACCGGGACGTTCAATACTGTCAATCGCTCTCCAGATGGGAGGTATGTTGCAGTCTCAAGTCGTGGCAACTTCTATCTAACATGGGAACCTGGTCAGCCATTCTGGCAGCCACATAATAGAGCAGTTGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTCTGTGGCTTCTTGTTCGTGGTGGTGGCCTTTATCTCAGCAAGGGCACAGGGTTGACCGAAGAATTTGAGGAGGTTCCAGTTCAAAGCCGAGGTTTTGGCATTCTTGATGTGGGGTATCGATCACAGGAGGAGGCTTGGGCAGCAGGTGGAAGTGGTATTCTGTTGAGAACTACTAATGGTGGCAAGTCATGGATCCGTGACAAAGCTGCTGACAACATTGCTGCAAATTTATACTCAGTGAAGTTCCTTGATGACAAGAAGGGATTTGTATTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATGA 1251 0.494 MATLRFTDCSNLTSTFFRPSLPSLYAAKSRHSQNPQNRNTSTGSCTFVPRASLQPHQDDQFSLSRRRFIADTAAVSLSIPQLVGFEQAARSEEALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSQEEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFLDDKKGFVLGNDGVLLRYLG* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1370 416 Pfam Photosynthesis system II assembly factor YCF48 93 414 IPR028203 -
Amo13g1370 416 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 97 415 - -
Amo13g1370 416 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 57 416 - -
Amo13g1370 416 Gene3D - 158 383 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1370 Amo-Chr13 18220757 18224881 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1370 - - ming:122064600 697.967