Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1368 ATGGCTCCCGGGCGTCGACGCGGAGCGAACAAGGCGAAGGCGAACGGACACTTGCGGTTAGGCGATCTCGTCCTCGCTAAGGTCAAGGGCTTCCCTGCTTGGCCTGCCAAGATAAGCAGGCCTGAAGATTGGCAGAAGCCCCCTGATCCAAAGAAATATTTTGTTCAATTTTTCGGTACTAAAGAAATAGCTTTTGTTGCCCCTGCAGATATTCAGGCTTTTACCAGTGAGTCTAAAAATAAGTTGTCTGCACGGGGTCAAGGCAAGACTAAGTACTTTACTCAAGCTGTGAAGGAAATCTGCGCAGCATTTGATGAAATACAGAGACAGAAGCCTAGTGGTTTGACAGATGATACTGATAACTCTAATGTTGGGTCAGAGGCTCCTTCCGTTGATGGAGGAGTGGGTAACATAGCAGACACTAATGATGCTGCGGTATCAAACAGTGAGAAAGATAGCAATGCTTGCTCTACTTTTGAGAACTCTGCTCAATTAATTGGAGAACATGAAAGGCAAGATGAGAAGCTTTCTGTACCTAACCTTGAAAGTTCTTCACCTGTGGTAAAAAATAAGTTATCTGTTAGTCCAGTTATAAAGAATGCTAACAAATCTATTGCTGCAAAGAATGCTGGTGTTTTTAGACAAGAAGAAGGTGTGCATAGTCTTTTGACAAATGGAAGCAAGCCTAGAAAGCTTGGTACCGACTCAAAAAGAAATGATGCTGCAGATGATCGAAATCAAAATGGTGGATCTTTTGCTGGGTCATTTTCAATGAAAGGAGACTCTACTGAGGGTGCTAATCTTTCCAGATCTGGAGAGACATTGAAAAGTGGGAAAAAAAGGAAAAATTCATTTTCTGTTAAATCAGATTCTCTTGATATTCTTCATTCAGACTCAAAGGATCATACTGGAACAAAAAATAAGACCTTATTAAAAGTTAAAAGAAGCCTGGATTCTGAGGAGGCTGATTCCAAAGATTCTGGGAAGCAAAAGAAGATCCAAATACATGCAAAGAATACCAAGAAGCTTAAGCGCATGGATGCCAAAGATGATAGAAGCACTTCTCCTGGTTCTACTGTTGAAGAAAAAGTTTCTAAAAAGCCAGAGTTGAAAAGGTCCATATCAAATTTGAAAACGGAAAAAAGCATGCCATCAAGGAGTCACATTGGTGTAGGTTCTGATGATTCTGGCTCTGAGGCACTACCAGGGACCAAAGTTCACAGCCATGTACGACAAGTTGTCTCTGATTCTGGTAGCATTGCTTCTGATGAGAAGATAGAGAAGAGTTCTCTTAGACTGAAGGCTGATGCAAATAATGTCATGGTAAAACCAGGACCGCGGAAACGCAGAGCTGTTCGCCTCTGTGACGATGACGATGAGGATGAACCTAAAACTCCTATTCATGGAGGAGCTGTAAAAAGTATTAAGTCACCATCTTTTGTTCCGGAGGTCTTGAAGAGTAACAAGGCACAACCAGAGAAATCTGATCATGCTCAGCCACTTCACAAAAATTTTAGTGAAGTTGAGCATATCCCTTCGAAAGAAGCATCTTCTCAGTTAAATAATGATATCTCATCTTCTAAGCAGCCTGGGAAAGAGAAAGCTGATGAAATTATTCCTGTACATAATAGTCCTGAAAAATTCGATCCAAAGCAAATTCCTTCAAAGGTGGCAAAATTGCGCACTGGGTCTCCAGTAAAATCACCTCAGTCTGTTCCTGCAGCAAAGTCAACTGCCGAGCAACATAAAGCTTCCAAACCTTCACTTAAAGTTTCCAGTAGTGCTACTGAAAAGAAGGCTGCTCATGGATTTTCAAAGTCTTCTAATAACATAAGTACTTCTCAGAATCAGACTGCATCTCATAAAAAGAAGCTTGGATCTTCAGTAGAAATTTCTAAAACTACTCCAAAAAGATTGCAGCAGGATGCTGAAGTTCCTGCGGCAACAGGTGGTTTAAAGGAGGCTGATGCTTTTCATCGTTTGGATGTAAGCATGGAAGAAAAAAGCAGTTTATATATTGGTTCTGGGACTCCAGAAGCTGCTAAAAGTATGAAGCATCTGATTGCGGTTGCTCAGGCGAAAAGAAGACAAGCTCATTCTCAAAGTTTTCCTCTTAGCATTCACAATATTCAAGAAGGGACTCCTAGCCCATCCACAGTTCAGTCATTTCTGCCTGCCTCAGGCCATGTTACACAGGCAGATGTGCAGGCAGTTTATGAGAATCCAACATTGGCATCTCCATCAACCAATGATCCTCTCTCGGCTTCTCAAAATCAACCTGATACTGAGGAAATCGAGGACGTAAGAGTTGGTTCAGCACAAAGGGGTCCAGGGGGTTCGCTTAGTGGAGGCACTGAGGCTGCTGTTGCTCGTGATGCTTTTGAAGGAATGATTGAAACATTGTCAAGAACAAAGGACAGTATTGGGCGTGCAACTCGCCTTGCCATTGACTGTGCTAAGTATGGCATTGCCAATGAGGTTGTTGAACTTCTCATCAGAAAGCTGGAAAGTGAAACTAGTTTTCACCGCAAGGTGGATTTGTTCTTTCTTGTGGACTCCATCACCCAGTGCTCGCATAATCAGAAAGGCATTGCTGGAGCCTCCTACATCCCTATAGTTCAAGCAGCATTGCCACGCCTTCTTGGTGCTGCTGCTCCCCCTGGGGCTAATGCGCGTGAGAATCGTCGTCAGTGTCTGAAGGTTCTAAGGCTGTGGCTTGAGAGGAAAATTTTGCCTGAATCAGTTCTTCGCCGTCACATGGATGAGATTGGAGTTTCAAATGATGATATAACAGTTAGCCTTTCCCTCAGGCGTCCATCTAGAGCTGAGCGGTCAGTGGATGACCCAATCAGAGAAATGGAAGGCATGCTTGTTGATGAATATGGCAGTAATGCTACATTTCAGCTGCCTGGCTTTTTATCTTGCCAACCATTTGATGACGATGAGGAAGATGATGATTTACCGGTTAATTCAAGTAAGGATACATATGATGCATCTCCAGCACATCTAACGCCCACCCTTGGGGAATCGGAAACTTCTACTGTTACCCCAAATGACAAGCGCCATTGTATCTTGGAGGATGTGGATGGCGAACTAGAAATGGAAGATGTTTCAGGCCACCTGAAGGACGAAAGGACTGAATTTCATAATAGTTCTGATGAAGTAGATTTGCAACCCCAAGGATCAGATAGGAACTTGGATCTTACTTCAAACATGTCAGCAGAGATACCCATTTCTGTGGAGGGTTCTCCGCCATTACCACCTGGTTCACCTCCTCCACCCCCACCTTTGCCTTCTTCACCTCCACCACCACCTCCTCCATCATCTCCATCTCCACCCCCACCTCCACCACCTCCAATGTTGCAACCCCCACCTCCTCCTTTACCACCCTCGTGCCCAACGGTGCCATTGGTTCCACAATCATCTGGAGTTGCTCGCCCTTCGCACCTCTCCCAGTCAATAAGGCCACCTCAGCCATCACATCAGTCGTCTCCGCAGTTAGGTTATCATCAGAATGTGCCTCATAACTATAGTGCCACAACAAGTGGTAATCAGTTTGTTCAAATGGCTGGGAATGCTTTTCCTGGAGGTCACGGTAATGCAGTTGCGAAGAATGAAATATTCCCACAAGCAGCTGCTTTTGCACCAACAGCAGCCTGCAGCACCCAGGAACCACCTTCTGGTTTTAACCCTTCAAGGCAATTAGAATATGGACAAAATGATATGTATGCAAATGTGCAAGTTCCCCAAGCCAACCATCAATTTCAACAGAGTAATCTACCGTTTGCTCAAAGACCGGGACATCCTGCCCCACCCCAAAGTTCTTCAAGTCAGTACTCTTTTCCAAACCCTACAGTTCAGCAGCATCCTCCACATTCATTCCATCCACCTTTCCCTTTGCCATCCATTCCAGATGGCCGGAGGCAATTTGTTGCTGATGACCAATGGAGAATGTCGTCAAGTGAATTTAAAACGAACAATCAACACGGTGTTTGGAGAGGGCAAAATCCTTCATGCTCTGGTCCACCGTTTGGGCAAGAAGGTCATTTCCGGCCACCAGTTGAAAGACCACCAGTAAGCAACATAGGCTTCCAGCATGCAATGCCAAATAACATACCTGCTGCTCCACCAACATCAGGACATGGTATTCCCCAGATGTTGCCTTGTAGGCCTGACATGCCTGCTCTGAATTGTTGGAGACCGACTTGA 4209 0.4457 MAPGRRRGANKAKANGHLRLGDLVLAKVKGFPAWPAKISRPEDWQKPPDPKKYFVQFFGTKEIAFVAPADIQAFTSESKNKLSARGQGKTKYFTQAVKEICAAFDEIQRQKPSGLTDDTDNSNVGSEAPSVDGGVGNIADTNDAAVSNSEKDSNACSTFENSAQLIGEHERQDEKLSVPNLESSSPVVKNKLSVSPVIKNANKSIAAKNAGVFRQEEGVHSLLTNGSKPRKLGTDSKRNDAADDRNQNGGSFAGSFSMKGDSTEGANLSRSGETLKSGKKRKNSFSVKSDSLDILHSDSKDHTGTKNKTLLKVKRSLDSEEADSKDSGKQKKIQIHAKNTKKLKRMDAKDDRSTSPGSTVEEKVSKKPELKRSISNLKTEKSMPSRSHIGVGSDDSGSEALPGTKVHSHVRQVVSDSGSIASDEKIEKSSLRLKADANNVMVKPGPRKRRAVRLCDDDDEDEPKTPIHGGAVKSIKSPSFVPEVLKSNKAQPEKSDHAQPLHKNFSEVEHIPSKEASSQLNNDISSSKQPGKEKADEIIPVHNSPEKFDPKQIPSKVAKLRTGSPVKSPQSVPAAKSTAEQHKASKPSLKVSSSATEKKAAHGFSKSSNNISTSQNQTASHKKKLGSSVEISKTTPKRLQQDAEVPAATGGLKEADAFHRLDVSMEEKSSLYIGSGTPEAAKSMKHLIAVAQAKRRQAHSQSFPLSIHNIQEGTPSPSTVQSFLPASGHVTQADVQAVYENPTLASPSTNDPLSASQNQPDTEEIEDVRVGSAQRGPGGSLSGGTEAAVARDAFEGMIETLSRTKDSIGRATRLAIDCAKYGIANEVVELLIRKLESETSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPIVQAALPRLLGAAAPPGANARENRRQCLKVLRLWLERKILPESVLRRHMDEIGVSNDDITVSLSLRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLPGFLSCQPFDDDEEDDDLPVNSSKDTYDASPAHLTPTLGESETSTVTPNDKRHCILEDVDGELEMEDVSGHLKDERTEFHNSSDEVDLQPQGSDRNLDLTSNMSAEIPISVEGSPPLPPGSPPPPPPLPSSPPPPPPPSSPSPPPPPPPPMLQPPPPPLPPSCPTVPLVPQSSGVARPSHLSQSIRPPQPSHQSSPQLGYHQNVPHNYSATTSGNQFVQMAGNAFPGGHGNAVAKNEIFPQAAAFAPTAACSTQEPPSGFNPSRQLEYGQNDMYANVQVPQANHQFQQSNLPFAQRPGHPAPPQSSSSQYSFPNPTVQQHPPHSFHPPFPLPSIPDGRRQFVADDQWRMSSSEFKTNNQHGVWRGQNPSCSGPPFGQEGHFRPPVERPPVSNIGFQHAMPNNIPAAPPTSGHGIPQMLPCRPDMPALNCWRPT* 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1368 1402 MobiDBLite consensus disorder prediction 245 273 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 1260 1307 - -
Amo13g1368 1402 SMART 558neu5 793 924 IPR006569 -
Amo13g1368 1402 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1402 - -
Amo13g1368 1402 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 975 1021 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 489 510 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 1260 1288 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 340 376 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 742 785 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 114 128 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 274 333 - -
Amo13g1368 1402 Gene3D - 785 929 IPR008942 -
Amo13g1368 1402 Gene3D - 10 113 - -
Amo13g1368 1402 PANTHER PROTEIN HUA2-LIKE 1 1 1402 - -
Amo13g1368 1402 SUPERFAMILY Tudor/PWWP/MBT 13 110 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 742 761 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 1144 1180 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 449 467 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 511 528 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 1046 1180 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 220 651 - -
Amo13g1368 1402 CDD HDGF_related 18 103 IPR035496 -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 564 639 - -
Amo13g1368 1402 SMART PWWP_4 18 75 IPR000313 -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 1289 1303 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 992 1019 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 1081 1136 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 111 157 - -
Amo13g1368 1402 ProSiteProfiles CID domain profile. 786 927 IPR006569 -
Amo13g1368 1402 Pfam CID domain 793 917 IPR006569 -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 1053 1077 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 141 157 - -
Amo13g1368 1402 MobiDBLite consensus disorder prediction 529 544 - -
Amo13g1368 1402 Pfam PWWP domain 21 104 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1368 Amo-Chr13 18195860 18208845 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1368 - - gmx:100800279 1351.27