Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1330 ATGGGGAGCGTTTCTTCTGAAGATGGTTCCGACCAGCAAAGTGACCGTTGCGGCAGTTACAGTCTCAGTGCTGACGTCAGCGAGTCCGAYAGRTGCAGCAGCTTCTGTGGACGTCYTTTTGARGCCGACGGTGGAGCTTCCAGCTCCGCCAACTTGTCTCCGCGTCCTGTCGGTGGAGCTGCTGTTCCCGCCGGCGGRCACTTTCACTTTCCGTCGCAGGTCATGCTTCCCGTCATAGGAGGAAAAGACGTGGTGGTTTGGGATCACAAGCCAGAGAAAAGAGACCTTGATTTGTCAGAAGTGGAAATGATGAAGGAGAGGTTTGCTAAARTGCTTCTTGGAGAGGACATGTCTGGTGGAGGAAAAGGAGTATGCACMGCRCTTGCAATCTCTAATGCAATAACCAATCTCTCTGCAACTGTGTTTGGCGAGTTATGGAGGTTAGAYCCGCTGGCACCTCAGAAGAAGGCCATGTGGCGTAGGGAAATGGAGTGGCTTCTATGTGTGAGTGATTCCATTGTGGAGCTTGTGCCTTCTGTGCAGCAGTTCCCCGGTGGCGGAACWTATGAGGTCATGGCGACGCGGCCTCGATCCGATTTGTACATCAATCTACCGGCTCTGAAGAAGCTAGATGGAATGCTGCTTGGTATGCTTGATGGATTTCAGGATACAAAGTTTTGGTATGTTGATAGGGGAATACTATTGGGTGATTCCAAGGAATGTGATGATGCATATTCGCCCGGAAGGGGTAGGACTTCRGTTAGGCAAGAGGAGAAATGGTGGCTTCCATCTCCTAAGCTTCCACCAAATGGATTGTGCGAGGATGATAGGAAAAGGCTGCAGCAGTGCAGGGATTGTACAAATCAGATATTAAAGGCTGCCATGGCAATCAACAGTTCCGTTCTTGCTGAAATGGAAATTCCTGGTGCATATATTGAATCATTACCAAAGAATGGAAAAGCTTGTCTGGGGGAGATAATCTATAGATACATTACTGCTGATCAATTCTCGCCTGAATGTCTCCTTGATTGCCTGGATCTATCTTCGGAGCATCACACTCTGGATGTAGCTAATAGAATTGAGGCTGCCGTTCATGTATGGAGGTTGAAGGACCACAAAAAACATCTAAATACAGTTAAAGCCAGACGCTCCTGGGGTGGAAAGGTGAAGGGCCTTGTTGCTGATGGTGGTGGTGATAAGAACCATTCTTTAGCCCAACGAGCTGATACCCTTCTGCAAAGCTTGAAACACAGATTTCCGGGGCTCCCTCAAACTGCGCTAGACATGGCCAAGATACAATATAATAAGGATGTAGGACAGTCTATTCTTGAGAGTTATTCCAGGGTCATGGAAAGCTTGGCATTCAACATAATGGCAAGGATAGATGATGTCCTTTATGTCGATGATTCCATAAAGCGATGCGCAGCCGCAGAGTCTATCTCTCTTTTCAACCGGGGAGGTTTCGGTGGTCTTCCAATCCAGAAAAGAATGACTCCAAGTCCCTTCTCAATTCAACACACCCCATATGCCTCTCCTCCATTTGCAACCCCATCATTTTGTTCATCCTCACCCATTACCGGTAGCCCTTGCAGTCCAAGAAGGATGCATACTGCGAAGAGGAATGGACCAAAGGACACAACAGATTCTACTAAGTCCGAAAAGGCAGCCTCGGCCGAATTTGAGAGGGTCTGGTCATACACAGGGAACCTTAGTGCAAGAAGAATGTCTAGTGATGCTCCAGAAAGAGACTGA 1752 0.4783 MGSVSSEDGSDQQSDRCGSYSLSADVSESDRCSSFCGRXFEADGGASSSANLSPRPVGGAAVPAGGHFHFPSQVMLPVIGGKDVVVWDHKPEKRDLDLSEVEMMKERFAKXLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLDPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLGMLDGFQDTKFWYVDRGILLGDSKECDDAYSPGRGRTSVRQEEKWWLPSPKLPPNGLCEDDRKRLQQCRDCTNQILKAAMAINSSVLAEMEIPGAYIESLPKNGKACLGEIIYRYITADQFSPECLLDCLDLSSEHHTLDVANRIEAAVHVWRLKDHKKHLNTVKARRSWGGKVKGLVADGGGDKNHSLAQRADTLLQSLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAAESISLFNRGGFGGLPIQKRMTPSPFSIQHTPYASPPFATPSFCSSSPITGSPCSPRRMHTAKRNGPKDTTDSTKSEKAASAEFERVWSYTGNLSARRMSSDAPERD* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1330 583 ProSiteProfiles PRONE domain profile. 91 478 IPR005512 GO:0005085
Amo13g1330 583 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 2 583 - -
Amo13g1330 583 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 99 472 IPR005512 GO:0005085
Amo13g1330 583 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 2 583 IPR038937 GO:0005085
Amo13g1330 583 MobiDBLite consensus disorder prediction 1 21 - -
Amo13g1330 583 Gene3D PRONE domain, subdomain 1 91 336 - -
Amo13g1330 583 Gene3D PRONE domain, subdomain 1 337 478 - -
Amo13g1330 583 MobiDBLite consensus disorder prediction 520 556 - -
Amo13g1330 583 MobiDBLite consensus disorder prediction 538 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1330 Amo-Chr13 17718240 17721426 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1330 - - adu:107477244 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1330 13 17718240 17721426 Amo13g1330 13 17718240 17721426 ECH