Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1326 ATGATCAGGGGTGAACCATTATCACTCTCTTGCCTTCTCAGCTTTTGTTCAATATTGTTGTTGCTATTGAACAGCATTATTAACGTTGCTGGGGAAGACCCTTATAGGTTCTTTGATTGGACCATTACCTATGGTGACATTTATCCCCTTGGAGTTAAACAAAAGGGCATTTTGATCAATGGACAATTTCCAGGGCCTGAAATCTACTCTGTTACCAATGACAATTTGATCATCAATGTTCACAATAACTTGCCGGAGCCGTTTCTTCTAACATGGAGTGGTGTTCAAGAAAGGAGAAACTCTTACCAAGACGGAGTATATGGAACAACATGCCCAATTCCACCTGGGAAAAATTACACATACACCCTTCAAGTGAAAGACCAAATTGGAAGCTTCTTCTATTTCCCATCACTTGCTTTCCACAAAGCTGCTGGTGGCTTTGGCTCCCTTAAGATCCTCAGCAGGCCTTTGATTCCTGTCCCATTCCCTCCCCCTGCTGATGATTTCTCTCTTCTCATTGGAGATTGGTACAGCATTGACAACAATAGGCTCAAGGCTGTTCTTGATTATGGACACAAACTTCCATTCCCTCATGCTGTTTTAATCAATGGTCGTCCAAATGGAGCAACTTTCACCGTTGAACAAGGAAAAACATATAGGCTTAGGATATCAAATGTTGGACTCCAGAACACACTGAACTTTAGGATTGAAGGACACAGCATGAAACTGGTGGAAGTTGAGGGAACTCACACATTGCAGAGCACATATAGCTCAATAGATGTCCACGTGGGACAATCTTATTCGGTGCTGGTGACAGCAGATCAAGCAGCCAAGGACTACTACATTGCTGTCTCAACTCGTTTCACTTCTAAGGTCCTCACAGCAACCGCCGCCCTTCACTATTCTAACTCCAACCAACCTCTTTCTGGTCCTCTTCCTCCTGCACCTACTCAACTTGATTGGTCCATTCAACAAGCTCGTTCAATTAGGACAAACTTGACAGCAAGTGGACCAAGGCCAAATCCACAAGGATCGTATCATTATGGTTTGATAAACATTAGCAGGACAATAATTTTGGAGAGCTCAGCAGCACAAGTTAATGGCAAGCAGAGATATGCAGTGAACAGTGTGTCTTTTGTTCCAGGCGACACTCCATTGAAGCTAGCAGATTACTTCAACATTGGTGGTGTCTTCCAAGTTGGAAGCATCCCAGATACTCCCTCCCATAAGCCAATGTATCTCGCCACCTCCGTCATGGCCGCCGATTTTCGAGCATTCGTTGAGATCGTCTTTCAAAACCACGAAAATATTGTCCAAAGTTGGCACATTGATGGATACTCATTTTGGGTTGTAGGAATGGATAGTGGTATCTGGACGCCTGATAGTCGTAAGGAGTACAACCTCGCCGATGCTGTTTCGAGGTGCACAACACAGGTATACCCTAGATCATGGACTGCGATTTACATGGCACTAGACAACGTTGGTATGTGGAACATAAGAAGTGAATTTTGGGCACGACAATACCTTGGACAACAATTCTATATGAGAGTATATTCACCAGTGGAATCTCCAAGAGATGAATATCCACTTCCAAAGAATGCTCTTCTTTGTGGCAGAGCTGTAGGCAGAACATAA 1635 0.4373 MIRGEPLSLSCLLSFCSILLLLLNSIINVAGEDPYRFFDWTITYGDIYPLGVKQKGILINGQFPGPEIYSVTNDNLIINVHNNLPEPFLLTWSGVQERRNSYQDGVYGTTCPIPPGKNYTYTLQVKDQIGSFFYFPSLAFHKAAGGFGSLKILSRPLIPVPFPPPADDFSLLIGDWYSIDNNRLKAVLDYGHKLPFPHAVLINGRPNGATFTVEQGKTYRLRISNVGLQNTLNFRIEGHSMKLVEVEGTHTLQSTYSSIDVHVGQSYSVLVTADQAAKDYYIAVSTRFTSKVLTATAALHYSNSNQPLSGPLPPAPTQLDWSIQQARSIRTNLTASGPRPNPQGSYHYGLINISRTIILESSAAQVNGKQRYAVNSVSFVPGDTPLKLADYFNIGGVFQVGSIPDTPSHKPMYLATSVMAADFRAFVEIVFQNHENIVQSWHIDGYSFWVVGMDSGIWTPDSRKEYNLADAVSRCTTQVYPRSWTAIYMALDNVGMWNIRSEFWARQYLGQQFYMRVYSPVESPRDEYPLPKNALLCGRAVGRT* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1326 544 CDD CuRO_3_AAO_like_1 383 502 IPR034275 GO:0005507
Amo13g1326 544 Gene3D - 349 542 IPR008972 -
Amo13g1326 544 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 19 540 - -
Amo13g1326 544 SUPERFAMILY Cupredoxins 31 181 IPR008972 -
Amo13g1326 544 Pfam Multicopper oxidase 168 303 IPR001117 -
Amo13g1326 544 Gene3D - 35 156 IPR008972 -
Amo13g1326 544 CDD CuRO_1_AAO_like_1 37 152 IPR034273 GO:0005507
Amo13g1326 544 SUPERFAMILY Cupredoxins 162 340 IPR008972 -
Amo13g1326 544 SUPERFAMILY Cupredoxins 350 539 IPR008972 -
Amo13g1326 544 Pfam Multicopper oxidase 42 154 IPR011707 GO:0005507
Amo13g1326 544 Pfam Multicopper oxidase 385 519 IPR011706 GO:0005507|GO:0016491
Amo13g1326 544 Gene3D - 166 338 IPR008972 -
Amo13g1326 544 PANTHER MULTI-COPPER OXIDASE 19 540 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1326 Amo-Chr13 17669449 17674147 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1326 - - gmx:100793934 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1326 13 17669449 17674147 Amo13g1326 13 17669449 17674147 ECH