Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1322 ATGGGAGGAGTTAGAATGCACACGAAATCCGACTCCGACGTAAGCATCGACCAATCAACATCGTCGCCACCGCGATCTCCACGCCGCCCACTCTACTACGTCCAAAGCCCATCCAACCATGACGTCATCGAGAAGATGTCGTACGGCTCCTCCCCCGCCGCATCACCCCAGCACCACCACCACTACTATGTCTGCTCCCCCGTCCACCACTCCCGCGAGTCCTCCACCTCTCGTTTCTCCGCCTCCCTCAAGAACCCTAGCCGCCACCCTCACCACCACCACCACACCTCCTCCTCCTTCGCACCCTGGAAGAAGCTCAGCCGCCACGATTCCGAAGCTGCCGGTGACGAGGACGACGACGACGACGACGCATATGATGACTCCGGCCGTAACATCCGCCTCTACTTCTGCTTCTTCCTTCTCTTCGTGGTCCTGTTCTCCGCGTTCTCTCTGATCCTTTGGGGTGCCAGCAAGAGTTACAAGCCTCGCGTCACCGTTACGAACATGGTGTTCTGGAATCTGAATGTACAATCTGGGAACGACGGAACGGGGGTGCCAACGGATATGCTGTCATTGAACTCAACGGTGAGGATCTCATACAGAAACCCTGCCACCTTTTTCGGCGTCCACGTCACCTCCACCCCTCTTCAGCTCAACTATTATCAACTCAAACTAGCCTCCGGCCAGATGCAGAAGTTCTATCAGCACAGGAAGAGTCAGAGGAAGCAAGTGGTAGTGGTGTTAGGCCACCAGATTCCACTCTACGGCGGGGTGTCGGTTCTCGGTGACACGAAACAGCACATGGAGAGTGTTGCATTGCCATTAAACCTCACATTTGTGGTGAGATCAAGGGCTTATATCCTCGGAAGATTGGTCAAGTCCAAATTCTACACAAGAATCCGATGTCCGGTCACCTTGCATGGCAACAAACTTGGAAAACCTCTTCACTTGATCAATTCATGTCTCTACGATTGA 975 0.5415 MGGVRMHTKSDSDVSIDQSTSSPPRSPRRPLYYVQSPSNHDVIEKMSYGSSPAASPQHHHHYYVCSPVHHSRESSTSRFSASLKNPSRHPHHHHHTSSSFAPWKKLSRHDSEAAGDEDDDDDDAYDDSGRNIRLYFCFFLLFVVLFSAFSLILWGASKSYKPRVTVTNMVFWNLNVQSGNDGTGVPTDMLSLNSTVRISYRNPATFFGVHVTSTPLQLNYYQLKLASGQMQKFYQHRKSQRKQVVVVLGHQIPLYGGVSVLGDTKQHMESVALPLNLTFVVRSRAYILGRLVKSKFYTRIRCPVTLHGNKLGKPLHLINSCLYD* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1322 324 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 61 323 - -
Amo13g1322 324 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 61 323 - -
Amo13g1322 324 MobiDBLite consensus disorder prediction 85 99 - -
Amo13g1322 324 MobiDBLite consensus disorder prediction 40 54 - -
Amo13g1322 324 MobiDBLite consensus disorder prediction 1 55 - -
Amo13g1322 324 Pfam Late embryogenesis abundant protein 197 302 IPR004864 -
Amo13g1322 324 MobiDBLite consensus disorder prediction 75 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1322 Amo-Chr13 17629497 17632657 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1322 - - gmx:100817846 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1322 13 17629497 17632657 Amo13g1322 13 17629497 17632657 ECH