Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1301 ATGGCGGAGGAGGAGGTGAAGGAAAGAAATTTCAGATCGGGAAGCAACTCCGATGCGATTCTGAAACCGCCATTGCCTCCTCATCAAGCTTCTACTTTGTTGATACACATTGATAATATTAATAATGAACATCAAAATCAACATCATCGTCGTCACTCTTCTTCTTCTTCCCAAATTTACCCTACTAATTCGGAATTCGAGGATGAACCTTCCTCTGGCCTTTCACAGCAGCAGGGTCCGAAAGATGAGTGGCTTCCAATCACGGAATCAAGAAATGGAAATGCATACTTTGCAGCGTTTCATATTCTCAATTCAAATATTGGATTTCAGGCTCTCATGCTTCCCGTTGCATTCGCCACTCTTGGTTGGGCATGGGGTAGTGTATGTTTGTCTCTGGCATTTATTTGGCAGCTATACACCATATTTCTCCTTGTTGAGCTTCATGAATCAGTTCCTGGAAATCGGCACAGCAGATTCCTCGTTCTCGCTATGGCTGCTTTTGGTAAGAAACTAGGGAAGGTGGCAGCACTATTTCCGGTGAGTTACCTCTCCGGAGGAACGTGCGTAATCTTAATTATCACCGGTGGTGGAACCCTAGACCTACTATTCAAGACACTTTGTGAAAAGGATAATTGTACTCTCCACTCACTAACTGGAGTTCAGTGGTATTTGATCTTTACTTGCATAGCCATTCTCATAGCTCAGTTGCCAAACCTCAATTCAATGGCTGCTGTTTCCGCCGTCGGCTCTGTCGCCGCCATCGCCTATTGCACACTCTTTTGGGCCATCTCCGTCAAGACGGGTAAGCCCAATGATGACGTGTCCTATAGTACAACGATGCATGGAAGTAACGTGGCTAAGGCTAATGACGTTATGAATTCCATTGGAATCATTTTGCTTGCTTTCCGGGGCCATAATCTTATACTCGAAATACAGGGAACGCTTCCATCAGATTCGAAAGAGAAATCCAACGTAAAAATGCGTAGAGGAGTGATCATTTCGTACGCAATAATTGCCATGTGCGTTTATCCCCTGGCTCTTCCCGGATTTTGGGCTTACGGAAACCAGATTGAAAAAGACGGGCTATTAACTTCGTTTGCACACATGCACGCTCATCAAGTGACGAAGTTCACAATAGGAGCAATGTACTTTTTGGTAATTCTACATTGCCTGAGCAGCTACCAAGTGTATGCGATGCCATTTTTTGACAACATTGAATTCAAAATCACAGCCAGAAAGAACAACAAGTGTCCAAGGTGGGTCAGAACATGCATTCGTCTTTTCTTTGGAGGATTAACCTTCTTTGTAGCCGTGGCGTTCCCCTTCCTACCATCACTGTCACTTCTTCTTGGTGGAATCGCATTCGTGCCAGTGTCTTATGCATACCCATGTTTCATGTGGGTGGCCATTAAGAAACCTCGTACGAGAAGCTTCGCTTGGTGCTTCAATGTTGTTCTTGGTTGCTTAGGAATGCTCATTGCTGCTCTTTTGATAGCTTCGGCTTTGAAGACTCTAATTGATAAACGTCTCAATGCCAATTTCTTCAAACCGTAA 1554 0.4427 MAEEEVKERNFRSGSNSDAILKPPLPPHQASTLLIHIDNINNEHQNQHHRRHSSSSSQIYPTNSEFEDEPSSGLSQQQGPKDEWLPITESRNGNAYFAAFHILNSNIGFQALMLPVAFATLGWAWGSVCLSLAFIWQLYTIFLLVELHESVPGNRHSRFLVLAMAAFGKKLGKVAALFPVSYLSGGTCVILIITGGGTLDLLFKTLCEKDNCTLHSLTGVQWYLIFTCIAILIAQLPNLNSMAAVSAVGSVAAIAYCTLFWAISVKTGKPNDDVSYSTTMHGSNVAKANDVMNSIGIILLAFRGHNLILEIQGTLPSDSKEKSNVKMRRGVIISYAIIAMCVYPLALPGFWAYGNQIEKDGLLTSFAHMHAHQVTKFTIGAMYFLVILHCLSSYQVYAMPFFDNIEFKITARKNNKCPRWVRTCIRLFFGGLTFFVAVAFPFLPSLSLLLGGIAFVPVSYAYPCFMWVAIKKPRTRSFAWCFNVVLGCLGMLIAALLIASALKTLIDKRLNANFFKP* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1301 517 MobiDBLite consensus disorder prediction 52 83 - -
Amo13g1301 517 PANTHER OS05G0424000 PROTEIN-RELATED 73 513 - -
Amo13g1301 517 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 7 73 513 - -
Amo13g1301 517 MobiDBLite consensus disorder prediction 1 85 - -
Amo13g1301 517 Pfam Transmembrane amino acid transporter protein 93 499 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1301 Amo-Chr13 17010929 17016303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1301 80 517 Organic Solute Cotransporters AT1G47670 48.858 1.36e-148 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1301 - - gmx:100817315 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1301 13 17010929 17016303 Amo13g1301 13 17010929 17016303 ECH