Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1295 ATGGAAGCAGAGACAACAGTTGTTTCAGAAGTTCCAGTGACAAAAGCTGTTGAGGACACAGATCATAAAGATGATAAAATTAAGGAAACAAACGGGGACTTGCCTCAAGTGGAGATTGAAGGTAAGAAAGAAGAGGAAGAGAATTCTTTTGATGGAGAATTCATTAAAGTCGAAAAGGAAGAGAACACGGTGACAGAAAGAAGCTCAGACTCAGATCCTCCAAGCAGAGAATTTCTAGAAGCACAAGAGAAGATTCAGGAACTCCAAGTTGAACTGCAGAGGCTAGCTGAGTCTTTGAAGACATCTGAACATGAAAATGCTCAGTTGAAGGGAGAGATTTCGGTTACAAAAGAGAAATTGGAGGAAACCGGAAAGAATTATCAAGAGCTTGAACTAAGTCACAAGAAACTACAAGAGCAGATTATTGAAGCTGAGGAGAAATATAAGCTGCAGCTGAGTGTTCTTGAGGAGGCAATGCAAAGTCAAGAATCGAAGCAGAAAGAGCTTCTTAACGTGAAGGAAGCATTCGATGGTGTGAGCCTTGAGCTTGAAAGCTCAAGAAAGAAGATGGAGGAATTGCAGCAAGAGCTTCAGCTTTCTTCGGACGAGGCTAGGAAGTATGAGGAGCTGCATAAGGAAAGTGGCTTACATGCTGAATCAGAAGGAAAGAAGGCCTTAGAATTCGAAAGACTATTAGAAGAAGCGAAATTGAGCACAAAAGTAGTGGAAGATGAGATGGCTTCTCTAAAGGAAGAATTGAAGGGATTGTATGATAAGATTGCTGAGAATGAGAAGGTTGAAGAAGCACTTAAAACAACTGCAGCAGAACTCGCTACCATCCAAGAAGAGTTGACAAACTCAAAATCTCAGATATTGGATTTGGAGAGTAGACTCTCTTCAAGGGACTCTCTAGTAGATGAGTTGAGCCAAGAATTGGAGCTGCGAAAGTCTTCGGAAACACAACTGAAGGAAGACATGTCAGCACTTCAAAACTTGTTTGCCTCCACAAAGGAAGAACTGCAAGAAAAGATATCTGATCTTGAAGCTGTGAATCTTAAGTTGCAGGAGGAAGAGAATTTGAGGGAATCAACCGAAGCTGCGCTGAAGACTCATGAAGCACAGCTTCTGGCTGTACAAGAGGAACTCTCTAAACTCGGTGTAGAAAAACAAGGTCTTGAATCATCTGTGGAAGATCTAACCAATAATGCTAAGCAGTTGAAGGAGTTGTGTGCTGATTTAGAGGAAAAGCTAAAGCTTTCGGATGAGAATTTCCAAAAGACGGATTCTCTTTTATCCGAGGCGCTTTCAAACAATGCCGAGCTAGAACAGAAGCTGAAGTCTCTAGAAGATCTCCATACTGAATCTGGAGCTGCTGCAGCTACTGCTACTCAAAGGAGTCTTGAGCTTGAAGGACATGTTCAGGCTTCAAATGCAGCTGTAGAAGAGGCGAAATCACAACTGAGGGAGATGGAAACACGATTCATAGCAGCGGAGCAGAAGAATGTGGAGCTTGAACAAGAGTTAAATTTATTACAACTGAAAACAAGTGATGCAGAGAGAGAACTGACTGAATTCTCTGAAAAAGTTTCTCATCTAAGTTCAAAGTTGACAGAGGCCGAGGAAGAAAAGAATGCTCTTAATAACCAACTCCAGGAGTACTCGGAAAAGATAAGTCAACTCGAATCGGACTTAAACCAATCATCTCAACAGAGTTCACAGTTGGAGGAGGAGCTGAAGTTAGCCAAAGACAAATGTGCCGAGCATGAAGATCGAGCCAGTATGAACCATCAGCGCAGCCGAGAACTAGAAGATTTATTTCAGAGCTCTCATTCCAAATTGGAAGATGCTGATAAAAAGGTGAATGAGTTGGAGTTGTTACTTGAAGCAGAGAAATACAGAATTCAGGAGCTCGAACAACAAATAAGCACTTTGGAAAAGAGATGCAGTGATTCAGAAGTAGATAACAATAAGCACCTTGAAAATATATCTTTTCTGACATCAGAACTTGATGCATTCCAAGCACGAGTCTCGAGCCTTGAAACTACACTTCAGGAGGCTAATGAAAGGGAAAAGAGTTTGGAAAACTCACTGAGTGCAGCAGCAGCTGAAAGAACAATGATAGAAGCTGCTTCAAGCAGTTTGAATGAGAAGCTTTCCGAAGCAGAAAGCCTTTTGGAAATTGTGAGGGATGATTTGAATCTCACACAAGAAAAGTTGCAAGGCACTGAGGATGATCTCAAGGCTGCTCAGTTGAGAGAAAATGAGATACTGGAGAAACTCAAGGCTTCAGAAGAAAATCATGTCATACGAGGAAGAGATATGGAGGAAACTGTCACGAAGCATGCCGAACTTCAATTGTTGCATGAGTCTCTGACCAGAGATTCTGAACAGAAACTCCAAGATGCTGTAGAGAAACTCAACAACAGGGAGTCTGAGGTTCAATCTTTGCTTGAGAAAATCAAGATTTTGGAGGATCAGATTGCTGAATCCGGGGAACAGTCCGCGTCGGTGAAGGATGAATATGAGAAGAGTTTGAGCAAGCTGGCTTCATTGGAAGGTGAAAATGAAGATTTGAGGAGGAAGATTACAGAAGCTGAGGAGAAGATTTCTCAGTCCTTTTCTGAGAATGACTTATTGGTTGGAACAAACATGCAACTGAAAATCAAGATTGATGAGCTTCAGGAATCACTGAACTCTGCTATATCAGAGAAGGAAGCTACTATTCAAGAAATTGTTTCTCAGAAGAGCACTATTGCTGAGTTGAATGATCTACATTCAAGATCCACTGAACTCCACAGTGCAAGCACGACTCGCATCCTCGAAGTAGAATCACAACTACAAGAAGCATTGCAGAGGCATACTGTGAAGGAATCCGAAGCGAAAGAGTTGAATGAGAAGCTGAACACATTGGAAGGCCAAATAAAGTTCCATGAAGAACAGGCACGAGAAGCAGCCGCGGTTTCTGAATCTCACAAAGCTGAACTCGAAGAGTCTCTTCAAAAGTTAAAGCATCTTGAAACTGTTGTTGAGGAACTACAAAATAAGGCACTCCACCATGAACAAGAATCTGCAGGACTACATGAGGAAAAATCAAAACTTAATAAGGAAATAGCATCATATGAATCAAAATTAAGTGATTTACAGTCAAAGCTTGATGCTGCACTAGTTGAGAAAGATGAAACAGTTCAACTGATACACTCATCCAAGAATGCTATTGACGAATTAGTGACAAAACATAATGCAGAAGCCGAGGCACTAAAGTCACAGATAGCTTCGGTAACAGAGGAGAAAAACTTGCTCAATGAGACAAATCAGGATTTGAAGAAGGAACTTCAGTCTGTGATACTTGCTCTTGAAGAAAAGTTGAAAGAACAACAGAAAATTGAAGAATCTTTGAAATCTGAGGTTGAAACTCTCAAAACTGAGATTGCTGAGAAATCTGCATTGCAAATTCGGCTGAAGGAAATCGAAGAGCAACTGGCAAAAGCTGAATCCAGATTAAATGAAGAGGTTGGAAGTGTTCAAGCAGCTGCTTCTCAAAGAGAAGCCGATTTAAGTTCAAAACTGGAAGAGTTGGAACAAAAAGTCCATGATAGAAATGTGCTGAATGAAAAGATTGTAGAGCTTGAGAAAGAGTTGCAGCTTGCACAAGAAACTATTGCTAACCAGAAAGGAGCAGAATCTCAAAAGTTGGAACTAGAGGCAGCCCTGAAGAGTTCTCATGAAGAACTTGAAAGTAAGAAAAAGGAAGTCTCTCTTCTACAGAACCAAGTGACAGATTTAGAACAAAAATTGCAAGTGGCTGCTGATAAATTATCAGCTAAGGGTGAGGGTGTTGAACCTAAAGAAGAGATGGAAGTTAAGTCCAGGGACATTGGATCAAGCATTTCAACACCATCAAAGAGAAAGAGCAAGAAAAAATCAGAAGCAACAACTTCTCAAGCATCATCTTCTTCTGAGGCACATATTCAAACAAATACTGTCCATGCTTCTTCTGCCATGAATTTCAAGTCCATTTTGGGAGTTGCTGTTGTGTCCATCATCTTTGGCATAATTCTTGGGAAGCGCTACTAA 4074 0.4094 MEAETTVVSEVPVTKAVEDTDHKDDKIKETNGDLPQVEIEGKKEEEENSFDGEFIKVEKEENTVTERSSDSDPPSREFLEAQEKIQELQVELQRLAESLKTSEHENAQLKGEISVTKEKLEETGKNYQELELSHKKLQEQIIEAEEKYKLQLSVLEEAMQSQESKQKELLNVKEAFDGVSLELESSRKKMEELQQELQLSSDEARKYEELHKESGLHAESEGKKALEFERLLEEAKLSTKVVEDEMASLKEELKGLYDKIAENEKVEEALKTTAAELATIQEELTNSKSQILDLESRLSSRDSLVDELSQELELRKSSETQLKEDMSALQNLFASTKEELQEKISDLEAVNLKLQEEENLRESTEAALKTHEAQLLAVQEELSKLGVEKQGLESSVEDLTNNAKQLKELCADLEEKLKLSDENFQKTDSLLSEALSNNAELEQKLKSLEDLHTESGAAAATATQRSLELEGHVQASNAAVEEAKSQLREMETRFIAAEQKNVELEQELNLLQLKTSDAERELTEFSEKVSHLSSKLTEAEEEKNALNNQLQEYSEKISQLESDLNQSSQQSSQLEEELKLAKDKCAEHEDRASMNHQRSRELEDLFQSSHSKLEDADKKVNELELLLEAEKYRIQELEQQISTLEKRCSDSEVDNNKHLENISFLTSELDAFQARVSSLETTLQEANEREKSLENSLSAAAAERTMIEAASSSLNEKLSEAESLLEIVRDDLNLTQEKLQGTEDDLKAAQLRENEILEKLKASEENHVIRGRDMEETVTKHAELQLLHESLTRDSEQKLQDAVEKLNNRESEVQSLLEKIKILEDQIAESGEQSASVKDEYEKSLSKLASLEGENEDLRRKITEAEEKISQSFSENDLLVGTNMQLKIKIDELQESLNSAISEKEATIQEIVSQKSTIAELNDLHSRSTELHSASTTRILEVESQLQEALQRHTVKESEAKELNEKLNTLEGQIKFHEEQAREAAAVSESHKAELEESLQKLKHLETVVEELQNKALHHEQESAGLHEEKSKLNKEIASYESKLSDLQSKLDAALVEKDETVQLIHSSKNAIDELVTKHNAEAEALKSQIASVTEEKNLLNETNQDLKKELQSVILALEEKLKEQQKIEESLKSEVETLKTEIAEKSALQIRLKEIEEQLAKAESRLNEEVGSVQAAASQREADLSSKLEELEQKVHDRNVLNEKIVELEKELQLAQETIANQKGAESQKLELEAALKSSHEELESKKKEVSLLQNQVTDLEQKLQVAADKLSAKGEGVEPKEEMEVKSRDIGSSISTPSKRKSKKKSEATTSQASSSSEAHIQTNTVHASSAMNFKSILGVAVVSIIFGIILGKRY* 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1295 1357 Coils Coil 946 1057 - -
Amo13g1295 1357 Coils Coil 1230 1271 - -
Amo13g1295 1357 MobiDBLite consensus disorder prediction 15 77 - -
Amo13g1295 1357 Coils Coil 1076 1173 - -
Amo13g1295 1357 Coils Coil 232 297 - -
Amo13g1295 1357 Coils Coil 78 210 - -
Amo13g1295 1357 SUPERFAMILY Tropomyosin 574 850 - -
Amo13g1295 1357 Coils Coil 337 423 - -
Amo13g1295 1357 MobiDBLite consensus disorder prediction 1272 1322 - -
Amo13g1295 1357 Gene3D - 541 655 - -
Amo13g1295 1357 MobiDBLite consensus disorder prediction 1275 1290 - -
Amo13g1295 1357 MobiDBLite consensus disorder prediction 1 77 - -
Amo13g1295 1357 Coils Coil 669 703 - -
Amo13g1295 1357 Coils Coil 883 910 - -
Amo13g1295 1357 MobiDBLite consensus disorder prediction 557 578 - -
Amo13g1295 1357 Coils Coil 473 591 - -
Amo13g1295 1357 Coils Coil 1175 1226 - -
Amo13g1295 1357 SUPERFAMILY Tropomyosin 379 623 - -
Amo13g1295 1357 PANTHER EARLY ENDOSOME ANTIGEN 1 1357 - -
Amo13g1295 1357 MobiDBLite consensus disorder prediction 557 575 - -
Amo13g1295 1357 Coils Coil 613 654 - -
Amo13g1295 1357 Coils Coil 431 458 - -
Amo13g1295 1357 Coils Coil 711 766 - -
Amo13g1295 1357 Coils Coil 792 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1295 Amo-Chr13 16871450 16880200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1295 - K20283 aprc:113870018 1811.96