Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1293 ATGATGAACAGGCTCTTCCGATCCACCACACTCACAGCGCAGGTTTCCAGAAGTTTGCATGAAAATCTTCTTAAGATTGCCTTATGGTCTCGATCAAACAGTACAAGTTCTTCTTTGGCAACAGACAACACCACTAATGATGCACGGTTCAAGGGCCATGATATGCTTGCCCCTTTCACAGCTGGGTGGCAGACAACTGATGTGAATCCTTTGGTTATAGACAAGTCAGAGGGAAGCTATGTATATGACATTAATGGGAAGAAGTATCTTGACTCACTTGCTGGTCTATGGTGCACAGCTCTAGGGGGGAATGAGCCACGTCTAGTTGAAGCTGCCACTGCACAACTGAACAAATTGCCATTTTACCATTCCTTTTGGAATCGGACTACAAAACCCTCTCTGGATCTAGCCAAGGACCTCCTAGAAACGTTCACAGCCAGAAAGATGGCGAAAGCTTTTTTTGTTAATAGCGGATCAGAAGCAAATGACACTCAGGTGAAACTTGTATGGTATTATAACAACGCACTTGGAAGACCAAATAAAAAGAAATTCATAGCTCGTGCTAAATCGTATCATGGTTCAACATTGATAGCAGCCAGTCTTTCTGGACTTCCAGCTCTGCATCAAAAATTTGATCTGCCTGCTCCTTTTGTCTTACACACTGATTGTCCACATTACTGGCGGTTTCATCTTCCAGGTGAGACAGAGGAAGAGTTTTCAACCAGATTAGCCAAAAATCTAGAGGAGCTAATTCTGAAAGAGGGACCAGATACAATTGCTGCATTTATTGCTGAGCCAGTTATGGGGGCAGGAGGTGTAATACCTCCACCTGCAACTTATTTCGAAAAGATCCAAGCTGTTGTCAAGAAGTATGACATTCTTTTTATTGCTGATGAGGTGATCTGTGCCTTTGGAAGACTTGGGACAATGTATGGATGTGACAAGTATGGCATCAAGCCCGATCTTGTCTCCTTAGCAAAGGCACTCTCGTCTGCATATTTGCCAATTGGAGCAGTTCTTGTGAGTCCAGAAGTTTCAGAAGTTATACACTCACAGAGCAACAAGCTTGGTTCATTTTCCCATGGGTTTACTTACTCTGGACACCCTGTATCCTGTGCTGTTGCAATTGAAGCACTGAAGATCTACAAAGAAAGAAATATTGTCGAGAAGGTGGCAAATATCTCCCCAAGGTTCCAAGATGGTGTAAAAGCTTTTGCTGACAGTCCTATCATTGGAGAGATCCGAGGAACTGGCTTAATTTTGGGTACCGAGTTCACAGACAATAAGTCACCTAATGATCCATTTCCTCCTGAATGGGGGGTTGGTGCCTATTTTGGAGCACAATGTGAGAAGCATGGTATGTTAGTTCGTGTAGCTGGGGATAACATTATGATGTCTCCACCGTTCATCATTTCTCCTGAAGAAGTTGATGAGTTAATAAGCATTTATGGGAAAGCCCTAAAAGGTACGGAAGAGAGGGTAAAAGAGCTCAAGTCTCAGCGGAAGTAG 1509 0.4341 MMNRLFRSTTLTAQVSRSLHENLLKIALWSRSNSTSSSLATDNTTNDARFKGHDMLAPFTAGWQTTDVNPLVIDKSEGSYVYDINGKKYLDSLAGLWCTALGGNEPRLVEAATAQLNKLPFYHSFWNRTTKPSLDLAKDLLETFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAKNLEELILKEGPDTIAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKYDILFIADEVICAFGRLGTMYGCDKYGIKPDLVSLAKALSSAYLPIGAVLVSPEVSEVIHSQSNKLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEKVANISPRFQDGVKAFADSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDNIMMSPPFIISPEEVDELISIYGKALKGTEERVKELKSQRK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1293 502 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 295 332 IPR005814 GO:0008483|GO:0030170
Amo13g1293 502 Gene3D Aspartate Aminotransferase, domain 1 71 487 IPR015422 GO:0003824
Amo13g1293 502 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 18 497 - -
Amo13g1293 502 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 18 497 - -
Amo13g1293 502 SUPERFAMILY PLP-dependent transferases 56 488 IPR015424 -
Amo13g1293 502 Pfam Aminotransferase class-III 69 486 IPR005814 GO:0008483|GO:0030170
Amo13g1293 502 CDD OAT_like 70 487 IPR005814 GO:0008483|GO:0030170
Amo13g1293 502 Gene3D - 105 387 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1293 Amo-Chr13 16859020 16866102 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1293 K16871 - pvy:116112175 879.011