Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo13g1255 | ATGGATAATTTAAAAGCTTCGTACAAAGACGAAGAGGAAGAAGACGGGGCACCAACCACCGCCGCCGTTGCGGCCGCTGACGCCGTCGTTGGCGACGCCCCGATTCCCAGTGACGCGGTAGCTGCCGGAGGAGGCACCGATACGGAATCAGCCGAAGTTCCTCCTGTAACAACCACCAGCACCGCCTCCGACACGCCAACGGAAGCTCAAAACGACGGCAGATCGGAGCCCGACCCTTCCGACATGTCTGATGACGAACCCGTCTCTGATGAAGGTTCCCTGAAGAAGTCGCCGAAGTCGCCTGCAAGAGACGATGGTGGCGGCGGTGACAACGACGAGGACGACGAGGAACCTCCCCCGAAGAAGCAGAAGCAGCTCTCCACATTGACCGCTGAAACCGTTACCGTTAAGATCGAATCTTCTCCGGTGGCTGCGGAATTGCCAGAAGGAGCTAGCAACGGCGACGCCAATGCGGCCGTGTCAACGCCGGCGACAACGGCCACGGGAACAACGGGGACGAATTCGAAGAAATCTAAGAAGAAGAACAACAATGTGTGGGTAACGAAATCGAAGAAATCAAAGAAGAAGAACAAGGCTAACAACAATAACAACAATCACCACGGCGCAAACGGCGAAGACACGGTGCTTATAACGCCGGTGCCGAGGTTCCCGGACAAGAGCGACGACACGGCGGAGATGAAGATCTGCCTCTCGAAGGTGTACAAGGCGGAGAAGGTTGAGCTGAGCGACGACCGAATGGTGGCAGGGAGCACGAAGGGCTACAGAATGGTGAGGGCAACGAGAGGGGTGGTTGAAGGAGCGTGGTACTTCGAAATTAGGGTTTTGCATTTGGGGGAAACAGGGCACACACGGTTGGGGTGGTCCACTGAGAAAGGTGACTTGCAGGCACCGGTTGGTTACGATGGGAATAGTTTTGGGTATAGGGATATTGATGGGAGTAAGGTGCATAAGGCTCTGAGGGAGAAGTATGGAGAAGAAGGGTATAAGGAAGGTGATGTTATTGGTTTCTATATCAACTTGCCTGAAGGGGAGAAGTATGCTCCAAAGCCACTGCATTTGGTTTGGTATAAAGGACAGAGATATGTTGTTGCTCAAGATGCTAAGGAAGATCCTCCCAAAGTTGTGCCTGGAAGTGAGATATCTTTCTTCAAAAATGGCGTGTGCCAAGGTGTAGCTTTCAAGGATCTTTTTGGTGGTCGATACTACCCTGCTGCTTCAATGTATACTCTCCCCAATGAACCAAACTGCATGGTCAAGTTCAACTTTGGCCCCGACTTTGAATTCTTTCCTGAGGATTTCCAAGATCGGCCGATTCCCAAGCCAATGATCGAAGTTCCCTACCATGGTTTTGATAATCGAGTTGAAAATGGAGAGGCTACTGAGAAGAAACCGTGA | 1416 | 0.5212 | MDNLKASYKDEEEEDGAPTTAAVAAADAVVGDAPIPSDAVAAGGGTDTESAEVPPVTTTSTASDTPTEAQNDGRSEPDPSDMSDDEPVSDEGSLKKSPKSPARDDGGGGDNDEDDEEPPPKKQKQLSTLTAETVTVKIESSPVAAELPEGASNGDANAAVSTPATTATGTTGTNSKKSKKKNNNVWVTKSKKSKKKNKANNNNNNHHGANGEDTVLITPVPRFPDKSDDTAEMKICLSKVYKAEKVELSDDRMVAGSTKGYRMVRATRGVVEGAWYFEIRVLHLGETGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKVHKALREKYGEEGYKEGDVIGFYINLPEGEKYAPKPLHLVWYKGQRYVVAQDAKEDPPKVVPGSEISFFKNGVCQGVAFKDLFGGRYYPAASMYTLPNEPNCMVKFNFGPDFEFFPEDFQDRPIPKPMIEVPYHGFDNRVENGEATEKKP* | 472 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo13g1255 | 471 | ProSiteProfiles | B30.2/SPRY domain profile. | 215 | 434 | IPR001870 | - | |
| Amo13g1255 | 471 | MobiDBLite | consensus disorder prediction | 1 | 217 | - | - | |
| Amo13g1255 | 471 | PANTHER | SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 | 67 | 455 | IPR037353 | GO:0048188|GO:0051568 | |
| Amo13g1255 | 471 | MobiDBLite | consensus disorder prediction | 182 | 201 | - | - | |
| Amo13g1255 | 471 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Amo13g1255 | 471 | SMART | SPRY_3 | 272 | 433 | IPR003877 | GO:0005515 | |
| Amo13g1255 | 471 | Pfam | SPRY domain | 275 | 351 | IPR003877 | GO:0005515 | |
| Amo13g1255 | 471 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 235 | 437 | IPR013320 | - | |
| Amo13g1255 | 471 | MobiDBLite | consensus disorder prediction | 155 | 181 | - | - | |
| Amo13g1255 | 471 | MobiDBLite | consensus disorder prediction | 88 | 107 | - | - | |
| Amo13g1255 | 471 | MobiDBLite | consensus disorder prediction | 123 | 137 | - | - | |
| Amo13g1255 | 471 | CDD | SPRY_Ash2 | 246 | 433 | - | - | |
| Amo13g1255 | 471 | Gene3D | - | 233 | 447 | IPR043136 | - | |
| Amo13g1255 | 471 | MobiDBLite | consensus disorder prediction | 51 | 73 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo13g1255 | K14964 | - | gmx:100796715 | 519.235 |