Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1252 ATGCCATATATGGCTTCTTTTCTTGTTTCTCCAATCCACAACCACCCTACCACTACCTTCCCATGCCTAATTTTCCATCCAACAACACCTATCTTCCACAACCCACTCTCTCTTCAAAACAACAAACTCTCTTCCCCACAATCCTTCATCAAATGTTCTATCTCAAGCCTACGCCCCCGAGACCAGGAGTATCTGCACCAAAAATCAAGAGACGAGGACGGAGAGGAGGAGGAAGAAGAAGAACTTGAAGAAGAAATTCTTCTCTCCCATGAACCTCCCTTGAACCAAGTGTGGAAACAAATCCAAGGCTCCAACGACTGGGAAGGCCTACTAGACCCCATGAACCCACACCTAAGAAGGGAAATTATCCGCTGCGGCGAGCTAGCACAAGCATGCTACGACTCCTTTGACTTTGACCCTCACTCCAAATACTGCGGCACCTGCAAGTACCATCCCTCACACTTCTTCGAGAAGCTTCTCATGGAAGAAAAAGGGTACACCATAAGCCGCTACCTCTACGCCACATCCAACATCAACCTTCCAAACTTCTTCCAAAAATCTTCCATTGCCAGCGTGTGGAGCCCACACGCCAACTGGATGGGATACGTGGCAGTCTCCACCGACGAGGACGAGATCCAGCGTCTCGGACGCCGAGACATCGTCATCGCCTGGAGAGGCACCGTCACGTACATCGAGTGGATCTACGACCTCAAGGACATTCTCACGCCCGCAAACTTCACCAACGACCCAACCATCAAGATCGAGTCCGGTTTCTATGACTTGTACACCAAGAAAGAAGACGCGTGCAGCTACTGCTCCTTCTCGGCGCGTGAACAGATCTTATCTGAGGTGAAACGTCTTGTACAGTATTACGAAGACGAAGAACTCAGCATAACCATAACAGGGCATAGTCTGGGTGCTGCTTTGGCCGTACTAAGCGCTTATGACATAGCGGAACTCAAACTGAACGTTATCGAAAACGGTGATGTAACGGCCAAGATTCCCGTAACGGTTTTCTCGTTTGCGGGGCCCAGGGTTGGGAATCTGAAATTCAAAGAACGGTGCGAGGAGCTTGGGGTGAAAGTTTTGAGGGTGATAAACGTGCATGACATGGTTCCAACCGTTCCAGGGATAATAACGAACGAGAAGTTTCAGTTTCAGAAGTACATAGAAGACGCGTTGAGTTTTCCGTGGAGCTACGCGCATGTTGGTGTGGAACTTGCATTGGATCATAGAGAGAGTCCGTTTTTGAAGGCGACGGGTGATTTAGGGTGCGCACATAACTTGGAGGCGCACCTGCACCTTGTTGATGGCTACCATGGGAAGAAGAGGAGGTTTAGGTTGGCTTCCAAGAGGGACATAGCGTTGGTGAATAAGAGTTGTGATTTCTTGAGGAGTGAGTATGGTGTGCCGCCGCACTGGCGACAGGACGAGAACAAGGGAATGGTCAGGAGCCGAGACGGCCGGTGGATCCTGCCCGAGCGGCCTAGGATGATGGCTCATCCACCGGACACGGCGCTTCATCTTGAGCAGGTCCTCAAGAGCCACCTTAATAATAGAGGTGCGCATATAGAAGCCACATAG 1584 0.5044 MPYMASFLVSPIHNHPTTTFPCLIFHPTTPIFHNPLSLQNNKLSSPQSFIKCSISSLRPRDQEYLHQKSRDEDGEEEEEEELEEEILLSHEPPLNQVWKQIQGSNDWEGLLDPMNPHLRREIIRCGELAQACYDSFDFDPHSKYCGTCKYHPSHFFEKLLMEEKGYTISRYLYATSNINLPNFFQKSSIASVWSPHANWMGYVAVSTDEDEIQRLGRRDIVIAWRGTVTYIEWIYDLKDILTPANFTNDPTIKIESGFYDLYTKKEDACSYCSFSAREQILSEVKRLVQYYEDEELSITITGHSLGAALAVLSAYDIAELKLNVIENGDVTAKIPVTVFSFAGPRVGNLKFKERCEELGVKVLRVINVHDMVPTVPGIITNEKFQFQKYIEDALSFPWSYAHVGVELALDHRESPFLKATGDLGCAHNLEAHLHLVDGYHGKKRRFRLASKRDIALVNKSCDFLRSEYGVPPHWRQDENKGMVRSRDGRWILPERPRMMAHPPDTALHLEQVLKSHLNNRGAHIEAT* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1252 527 Coils Coil 65 85 - -
Amo13g1252 527 PANTHER PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC 38 514 - -
Amo13g1252 527 Pfam Lipase (class 3) 221 378 IPR002921 GO:0006629
Amo13g1252 527 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 38 514 - -
Amo13g1252 527 Gene3D alpha/beta hydrolase 97 502 IPR029058 -
Amo13g1252 527 CDD Lipase_3 171 412 - -
Amo13g1252 527 SUPERFAMILY alpha/beta-Hydrolases 121 440 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1252 Amo-Chr13 16289048 16290763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1252 94 513 Acyl Lipid Metabolism Gene Families AT1G51440 73.953 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1252 - - gmx:100795661 753.436