Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1249 ATGAGCAACAGCATCGCTGGAATTGGAACTGGAAATGGAAATGGGAAAGTGGTGTGCGTTACCGGCGCTTCTGGTTACATAGCGTCATGGATAGTCAACCTCCTCCTTCAACGTGGCTACACTGTTAGGGCCACCCTTCGTGATCCAAGTAATCCAAAGAAGCTTGATCACTTGCTCAAACTCCACGGCGCAAAGGAGAGGTTGCAGATCTTTAAGGCGGACCTTCTAGAAGATGGCTCCTTTGACTCTGCCATTGACGGTTGCGATGGTGTCTTTCATACTGCTTCGCCTGTTACGCTTCGGGTTGTCAATGACCCGCAGGCTGAATTAATTGATCCAGCAGTGAAAGGAACCTTGAATGTCCTTCAATCCTGTGCAAAATCACCATCGGTGAAACGAGTAGTATTGACATCTTCTATTTCTGCGGTTCTATTTACAGATAGGCCTTTAACTCCCGATGTAGTGGTCGATGAGACATGGTTTTCAGATGCTGATAACTGTACAAAACTAGAGAGATGGTATTCACTTTCAAAGACTTTAGCAGAGGATGCAGCCTGGAAATTTGCAAACAAGAACGGCATTGACATGGTTTCTATTTTACCATCAATGGTAGCAGGACCTCTGTTACAACCAGAAGTTAATGAAAGCGTTGAGCCAATCCTAAGCATAATAAATGGTGCACCATTTCCAAATAGAGTTTTTGGATGGGTGAACGTGAAAGATGTCGCGATCGCCCATATTCAGGCATATGAGATTCCTACAGCTAGTGGAAGATATCTTATTGTTGAGAGAGTGGTGCACTACTCTGAACATGCTAGGATTTTGCATGATCTTTACCCAACATTACAGATTAAGGATAAGTGCGAAGACGATAAGCCATTTGTGCCAACATATCAGGTTTCCAAAGAAAAGGCAGAGAGTTTGGGAATCGAATTCACACCATTGGAAGTAACCCTCAAAGAGACTGTTGAAAGCTTTAGAGAAAAGAACATTGTCAACTTTTAA 1005 0.4338 MSNSIAGIGTGNGNGKVVCVTGASGYIASWIVNLLLQRGYTVRATLRDPSNPKKLDHLLKLHGAKERLQIFKADLLEDGSFDSAIDGCDGVFHTASPVTLRVVNDPQAELIDPAVKGTLNVLQSCAKSPSVKRVVLTSSISAVLFTDRPLTPDVVVDETWFSDADNCTKLERWYSLSKTLAEDAAWKFANKNGIDMVSILPSMVAGPLLQPEVNESVEPILSIINGAPFPNRVFGWVNVKDVAIAHIQAYEIPTASGRYLIVERVVHYSEHARILHDLYPTLQIKDKCEDDKPFVPTYQVSKEKAESLGIEFTPLEVTLKETVESFREKNIVNF* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1249 334 Pfam NAD dependent epimerase/dehydratase family 18 250 IPR001509 -
Amo13g1249 334 Gene3D - 16 334 - -
Amo13g1249 334 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 11 332 - -
Amo13g1249 334 CDD FR_SDR_e 18 309 - -
Amo13g1249 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 328 IPR036291 -
Amo13g1249 334 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1249 Amo-Chr13 16253992 16257072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1249 12 334 Miscellaneous Gene Families AT5G19440 66.667 3.26e-160 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1249 - - gmx:100799213 509.22