Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1238 ATGAAGAGAAAGGTTCTGTTGGTGAGTTGTGTTGTTGGATTCTTGGGTCTATTGTCAGCTGCAACTAGCTTTGGTGCAGAAGCGACAAGGATTAAGCGTTCTCAAGTTCAATTTGTAACCCCAAATCAATGCATATATCCTCGAACTCCAGCTCTACCTCTTGGTTTAACTGCAGCTCTGGCTCTCATGGTATCTCAGATTGTCATAAACGTCGCAGCCGGCTGCATTTGTTGCCGGAAATTCCCTCAAATCCCTGATTCCAGTTGGAAGGTGGCTTTGATCAGCTTCTCTTTATCCTGGTTCACATTTGTCATTGCGTTTCTTCTGTTGCTAACTGCTGCGGCGCTGAATGATCAACACGGCGAAGAGAGCATATACTTTGGCAACTACTACTGCTACATTGTGAAGCCTAGGGTGTTTGCAGGGTGTGCAATTTTATCCCTTGCAAGTGTTGCCTTTGGTATTGTCTATTATATTACCTTAGCTGAGGGAAAAAATGGTAACAACTCTTGTGATTCCTTGGATCCAAATCATGGGGGCATAGCCATGGGACAACCTCAGATACCACCAACTCAAGTTAGCCATGACCCACTGTTTGTACATGAAGACACATACATCAGAAGACAGTTCACATGA 636 0.4434 MKRKVLLVSCVVGFLGLLSAATSFGAEATRIKRSQVQFVTPNQCIYPRTPALPLGLTAALALMVSQIVINVAAGCICCRKFPQIPDSSWKVALISFSLSWFTFVIAFLLLLTAAALNDQHGEESIYFGNYYCYIVKPRVFAGCAILSLASVAFGIVYYITLAEGKNGNNSCDSLDPNHGGIAMGQPQIPPTQVSHDPLFVHEDTYIRRQFT* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1238 211 PANTHER OS07G0462200 PROTEIN-RELATED 1 197 - -
Amo13g1238 211 Pfam Protein of unknown function (DUF1218) 58 152 IPR009606 -
Amo13g1238 211 PANTHER PROTEIN, PUTATIVE (DUF1218)-RELATED 1 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1238 Amo-Chr13 16142341 16143834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1238 - - cam:101495253 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1238 13 16142341 16143834 Amo13g1238 13 16142341 16143834 ECH