Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1229 ATGCTCGTTTTCTCATGCTTCGGTCGGAAGACGAACGCAATAATGTGTACTTCTCAGCCTCAAACTTTTTCTCTTCCCTCTCCGATCCCGAATTGGCCTCACGGAGGAAGTTTTGCTTCTGGATTTGCAAATCTTGGTGAAATAGAAGCTTTCAAGGTCTCTAATTTTGAGTTCATTTGGAGCAGCAATGCTATGCAGGACAAAAAGAATGCTGTTGTGTTCTATAAGCCTGTCGAAATACCTCAGGGTTTCCACATCCTTGGCCATTATTGTCAACCTAGCAACAAGCCTTTAAGGGGTTTTGTGCTTGTTGCTAAGGAAGTTGAAACTAATCATTGCGATGATCACGACAAGCTACCTCCCCTGAGGAATCCCCTGAATTTTGAGTTAGTTTGGAGTTCGAATGCAGGAAATCGTGAAACTCTGAGTGGTTGTGGTTACTTTTGGATACCTGAGCCTCCAGAAGGTTACAAGGCAGTTGGATACTTGGTTACTGACAATCCTAATAAGCCTCAGTTGGATGAAATCTGCTGTGTTCGTTCTGACCTCACTGATAAATGCGAGCCTTACCGCCTATTACTCGCTGTAAATTCTAAAATTCCAGAGCTTTCATTTCAGGCTTGGAACTTGAGACCTTGTGATCGCAGCGTTCAAGGGCAAGGAGTTCCAGTTGGGTCCTTTTTCTGTAGTAACGGATGCTGGAACATCGGTGAAGAGCTTCCAATTGCATGCTTGAGGAACCTAAATCCTGTTCAACAAACAATGCCAAACCTGGAACAGATACATGCACTTATCCAGCATTATGGTCCTACCATTTTCTTTCATCCGGAAGAAGTTTACTTGCCGTCTTCTGTGGTCTGGTATTTCAACAATGGAGCTTGCTTGTACAGAAAGGGTGTAACTACAGGCGAGGCAATTGATGAAACCGGCTCAAATCTACCTCGTGGAGGAACGAATGACAAGGAGTTTTGGATAGACTTGCCAAGTGATGATAGAAAGGACTTTCTCAAACGCGGGGACTTGCAAAGTGCAAGGCTTTATGTTCATGTGAAGCCGGCACTTGGTGGAACTTTCACAGACATTGCAATGTGGATTTTCTGTCCATTCAATGGACCAGCCACTCTTAAAATTGGAATGAAAAACATACCTTTAAGCAAGATTGGAGAGCATGTTGGTGATTGGGAGCATTTCACACTTAGAGTATGCAATTTCAATGGAGAATTATATAGTATATACTACTCACAGCATAGTGGGGGAGAATGGGTTGATGCATATGATTTAGAATACATTGATGGAAACAAAGCTATTGTTTACTCTTCAAAAAATGGGCATGCTAGTTACCCTCATCCTGGAACCTTTATCCAAGGTTCTTCAAAACTTGGAGTTGGGATCAGAAACGATGCGTGTCGAAGCAACTTTTATGTGAATTCAAGTGTTCACTATGAGATTGTTGCAGCTGAATATCTTGGAGATGCTGTCAAGGAGCCTCTGTGGTTGCAGTATATGAGAGAGTGGGGGCCAAAAATCGTTTATGATTCGAGAACTGAGATTGATAGGATAATCGATGCGCTTCCGCGAATGCTTCGGTTCTCAGTGAAGAACTTCTTTAACAAGCTTCCAGTGGAGCTGTATGGTGAGGAAGGTCCTACAGGGCCAAAAGAGAAAAACAATTGGACAGGAGATGAAAGATGGTGA 1695 0.4301 MLVFSCFGRKTNAIMCTSQPQTFSLPSPIPNWPHGGSFASGFANLGEIEAFKVSNFEFIWSSNAMQDKKNAVVFYKPVEIPQGFHILGHYCQPSNKPLRGFVLVAKEVETNHCDDHDKLPPLRNPLNFELVWSSNAGNRETLSGCGYFWIPEPPEGYKAVGYLVTDNPNKPQLDEICCVRSDLTDKCEPYRLLLAVNSKIPELSFQAWNLRPCDRSVQGQGVPVGSFFCSNGCWNIGEELPIACLRNLNPVQQTMPNLEQIHALIQHYGPTIFFHPEEVYLPSSVVWYFNNGACLYRKGVTTGEAIDETGSNLPRGGTNDKEFWIDLPSDDRKDFLKRGDLQSARLYVHVKPALGGTFTDIAMWIFCPFNGPATLKIGMKNIPLSKIGEHVGDWEHFTLRVCNFNGELYSIYYSQHSGGEWVDAYDLEYIDGNKAIVYSSKNGHASYPHPGTFIQGSSKLGVGIRNDACRSNFYVNSSVHYEIVAAEYLGDAVKEPLWLQYMREWGPKIVYDSRTEIDRIIDALPRMLRFSVKNFFNKLPVELYGEEGPTGPKEKNNWTGDERW* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1229 564 PANTHER PROCESSING PROTEIN PRP39, PUTATIVE-RELATED 6 564 - -
Amo13g1229 564 Pfam Vacuolar protein sorting-associated protein 62 20 562 IPR009291 -
Amo13g1229 564 PANTHER - 6 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1229 Amo-Chr13 16025521 16027876 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1229 - - gmx:100811439 851.277