Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1197 ATGGTTAAGAATTTCTTGGCCATGAAAAGGTATCTGATAGTCCTTGATGACCTCTGGAAGACTCAAGACTGGGATGATGTAAAAGATGCTTTTCCAAACGACAATAATGGTAGCAAAATACTCATTACTAGCCGTTTGAAAGAGGTTGCATTGCATATGAGTTCATGTCCTCCTTATTACCTTCAATTCCTTGGTGATGATGAAAGCTGGGAACTCTTTTTCAGGAAAGTGTTTCAAGGAAAAGAGTGTCCTTCTGATCTAGAACATCTTGGCAAACAAATGGTTAAAAGTTGTGGTGGTTTGCCACTCTCCATTGTTGTTTTGGCAGGGTTACTGAAAAAAAAGGAGAAATCACAGAGGGAATGGTCCAGAGTGGTGGGAAATGTCAATTGGTATCTTACTCGAGATGAGACCCAAGTTAGGGACATTGTACTCAAACTCAGCTACCACAACTTGCCTAGGAGACTAAAGCCCTGCTTTCTGTATTTGGGGATCTACCCTGAAGATTGTGAGATCTCTGTAAGGCCATTGCTGCAAAAATGGGTTGCTGAGGGATTTATTCAACAAACAGGGACCAGAGATGTAGAGGATGTTGCAGAAGATTACTTGTATGAGCTCATTGATCGGAGCTTGGTTCAAGCATCGCGAGTGAATGTTAATGGAGATGTGAAAGCATGTCGCATCCATGATCTTCTTCGAGATCTTTGCATATCTGAGAGCAAAGAGGACAAGCTTTTTGAGGTTTGCACAAATAGTAACATTTTGGAGACATCAAAACCTCGCAGGCTTTCTATCCAATGCGGCATGGATCGGTATGTTTCTTCAAGCAAGAATGACCATTCATGTGTCCGCTCTTTGTTTTGCCTTGACCCAACAAGGTATGGTTTTACCCCCAATGAGATGAAATGGCTTTTTAAATTGTTCAAATTGGTTCGGGTATTAGATCTTGGAAAAAACTATTTCCTCAAAGTCCCTTCCAACTTGGGCTTATTTATCCATTTAAGGTATGTAAGAATAAATTTGGCAAGAGGAGAAAGTGGTCAAGTCATTCCAGATTCTATAAGCACACTAGAAAATTTACAAACTTTGGACATATATGGGATGCCGTATCCAATATATCTCCCTAGGAGAGTATGGAACCTGAAACAACTTAGGTATTTAAGGAGTAGTGGAACCATCATCCTACGAGGCTACCATGGTTCAAAAGCAGGTGATCAAGTCATGTGGAATCTGCAAACCATCTCTTTGATTAAATTCAATAGTCAGATTGCACGCATGATAGAGAACGGAAGGTTTCCCAAGCTACGAAAGTTGGGTTTGCACATCCACTCGGTCCAGAAAAAGAATGTGCATGAGTTGTTATCAACCCTTCGGCGATTAACTCATTTGAACAAGTTGGAACTTTCCTTTAGACGGAAGAATGACTACGGGTACATGGATTGGCACATCGGGCTCAAAGCAATTGAATTGTTACAAAGCCTGCAGCACTTGTCCAATCTGAGCACTTTAAAAGTTGATGGAGCTTTGGACCTTGCAACGTGTGATATTGCGTTTCCTGCATGCATTACAAAATTAACGTTGACAGGCATTAGCTTCATGAATGATGATGGGGTGAATGCCATTGGTAATCTTACTACACTCCGACTTTTGAAATTGCATGGAGCATATAAATTTGATGATCCCTTTGAGATTAATTGCCGTGCAGGCAGTTTCTCACAGCTCCAGGATTTTGAGATGGAGTGGGTGAATGTTGAGAACTGGAAATTAGGCAATGGTGCAATGCCATGCCTTCAAACTCTGCTTATCAAATGCTGTGAAAGATTGGACGATCTCCCAGATGAACTGTGGTCTTTGACTTCCCTGAGACAAGTAAAAGTTGTGGAACCCTCCCAAGCACTGTCTGATGCGCTAGCAAATTTGGAAAAGGATGGATGTGAGCTCATAATATCAAAGAAGAGTAAGGATTCTGTCTTCAACGTTTTCAACTTTTTGGGTCGGTCCTATTTGTATTCCTAA 2016 0.4117 MVKNFLAMKRYLIVLDDLWKTQDWDDVKDAFPNDNNGSKILITSRLKEVALHMSSCPPYYLQFLGDDESWELFFRKVFQGKECPSDLEHLGKQMVKSCGGLPLSIVVLAGLLKKKEKSQREWSRVVGNVNWYLTRDETQVRDIVLKLSYHNLPRRLKPCFLYLGIYPEDCEISVRPLLQKWVAEGFIQQTGTRDVEDVAEDYLYELIDRSLVQASRVNVNGDVKACRIHDLLRDLCISESKEDKLFEVCTNSNILETSKPRRLSIQCGMDRYVSSSKNDHSCVRSLFCLDPTRYGFTPNEMKWLFKLFKLVRVLDLGKNYFLKVPSNLGLFIHLRYVRINLARGESGQVIPDSISTLENLQTLDIYGMPYPIYLPRRVWNLKQLRYLRSSGTIILRGYHGSKAGDQVMWNLQTISLIKFNSQIARMIENGRFPKLRKLGLHIHSVQKKNVHELLSTLRRLTHLNKLELSFRRKNDYGYMDWHIGLKAIELLQSLQHLSNLSTLKVDGALDLATCDIAFPACITKLTLTGISFMNDDGVNAIGNLTTLRLLKLHGAYKFDDPFEINCRAGSFSQLQDFEMEWVNVENWKLGNGAMPCLQTLLIKCCERLDDLPDELWSLTSLRQVKVVEPSQALSDALANLEKDGCELIISKKSKDSVFNVFNFLGRSYLYS* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1197 671 Gene3D - 149 239 IPR036388 -
Amo13g1197 671 PANTHER - 3 649 - -
Amo13g1197 671 PRINTS Disease resistance protein signature 98 112 - -
Amo13g1197 671 PRINTS Disease resistance protein signature 495 511 - -
Amo13g1197 671 PRINTS Disease resistance protein signature 5 19 - -
Amo13g1197 671 SUPERFAMILY L domain-like 227 625 - -
Amo13g1197 671 Gene3D Ribonuclease Inhibitor 272 647 IPR032675 -
Amo13g1197 671 Pfam NB-ARC domain 2 149 IPR002182 GO:0043531
Amo13g1197 671 Gene3D - 63 148 IPR042197 -
Amo13g1197 671 Gene3D - 1 56 IPR027417 -
Amo13g1197 671 PANTHER DISEASE RESISTANCE PROTEIN RP 3 649 IPR044974 GO:0006952
Amo13g1197 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 163 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1197 Amo-Chr13 15596545 15598560 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1197 - - adu:107477359 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1197 13 15596545 15598560 Amo13g1197 13 15596545 15598560 ECH