Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1188 ATGGCTTCAAAAGCTACTAAATCCAATTTGTCTGAAACTCCCAACAAAACATCACTAGCAACTCCAAGAGGCAGCAAACTTAGCAGAGGAGTGTCCAAATCGGAATCCGAATCACCATCACCCTTGCAAAATCTGCGCCATTCCATTGAACGATCGCCGCGATCTGTGAATTCAAAGCCTGCTGCTACTCCTGATCGGAAATCACCAAAGCTTGCCTCCAACCCACCTGATAAACAACCAACAAGAGCTACAAAGGGTTCAGAATTGCAGAACCAGTTGAATCTTGTTCAGGAGGATCTAAAGAAAGCGAAGGAGCAGCTCATTCACGCTGAGAAAGAGAAGCTTAAAGTAATTAATGAGTTGAAAGAAGCACAGAGATTAGCTGAGGAAGCAAATGAGAAACTCAGGGAAGCATTGGTGGCTCAAAAGCGGGCTGAGGAGGAATCTGAGATTGAGAAGTTCCGAGCTGTTGAATTGGAGCAGGCTGGAATTGAATCTGCCCAGAAGAAGGAAGAAGAATGGCAGAAAGAGATTGAAAATGTAAAGAGCCAGCATGCTTTGGATGTTGCTGCTCTTCTCTCCACCACCGAGGAGCTCCAGCGTGTTAAGCAAGAACTCGCCATGACTTGTGATGCAAAGAACCAGGCACTGAACCATGCTGATGATGCAACTAAGATTGCTGAGATTCATGCTGAGAAGGCAGAGATTCTTTCAGCTGAACTGACTCGGTTGAAGGCATTACTTGATTTGAAACAGGAAACAGAGGCCAGTGAGAGTAATACTATATTGAAGCTGAAAGCAGAGGTAGAAGCTCTTAAGCAAGAACTTGCAAAGGCCGAGGATTATGATGAGAAGTTGGCAGAGAAAGAAACTACTATCGAACAGCTCAATGTGGAGCTTGAGGCCGCAAGGATGGCTGAATCATATGCTCATAGTGTTTTGGAGGAGTGGACGAAGAAGGTTGAGGAACTAGAGATGAGGGTTCAAGAAGCAAATAAGTTGGAAAAATCTGCATCAGAATCTTTGGAAAATGTCATGAAACAGCTAGAAGGAAGCAATGATTTGTTGCATGAAGCAGAATCTGAAGTTGCGGCTCTTAAAGAGAAGGTAGGATTGTTAGAAATGACTGTTGGGAGACAAAAGGCAGATCTTGAGGATTCAGAGCATCGGATTAATGTGGCCAAGGAAGAAAGTCTTGAAATGACACACAAGGTTGAAGCTCTCAAATCCGAACTTGAGACAGTTAAGGAAGAGAAGATTCAGGCTTTGAACAATGAAAAGCTTGCAGCTGCTAGCGTGCAGACCCTACTTGAAGAGAAAAATCAACTTATCAATGATTTGGAGAATTCTAGGGATGAGGAAGAAAAGTGCAAAAAGGCAATGGAAAGCTTAACTTCTGCATTACATGAAGTATCTGCAGAGGCTAGAGAAGCCAAAGAGAAGCTATTGAGCAGCCAAGCCGAACATGAAAATTACGAGACCCAGCTTGAAGATTTAAAGTCAGTTTTAAAAGCTACCAATGAAAAATATGAATCCATGCTTGATGATGCACGGCGTGAGATTGATGTTCTTACTTGTAATGTCGAAAATTCTAAGAATGACTTTGAGAACTCCAGAGCCGAGTGGGAAGAGAGAGAACATCAACTAGTCGGCTGCTTAAAGAAAACCGAAGAAGAGAATTCGTCCTTGGGAAAAGAAATAAATAGATTGGCTCTCTTGCTCAAAGATACCGAGGATGAAGCTAGTGCCAGCAGGGAGGAAGAAGCTCAGTTGAAGGAAAATCTGAAGGAAGTTGAGGCTGAGGCAATTAACTTGCAGGAAGCTCTTAAAGAAGCAACGGCCGAGAACGTGAAATTGAAGGAGAATTTATTGGATAAAGAAAATGAATTGCAGAGTATTATTCAAGAAAATGATGAACTCCGCACTAAGGAAGCTGAATCTATTAAGAAGGTGGAGGAGTTATCTAAGCTACTGGAAGAAATAACAGCCAGAAACCACACTCAGGAAAACGGGGATCTCACAGACAGTGAGAAGGATTATGATTTGCTTCCTAAGGTGGTTGAATTTTCCGAAGAGAATGGGCATGGAGGAGAAGATGTATTGAAGGTAGAAGATTCAGCAAATCAAGAAGTGCTCAAACAAGGCTTTCAAGAAGAGACTATTCCTGTGAATGGTAAGGCTGAAAAGATAGAATCTCCCAAACATGAGAATGGGAATGGAAAACTGAAGGAAGATGATGCTAGTAAGGAAAATGATAATTCAGTAGAAGTTGAACATAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTGTCGCCAGAGAGGGATCCAGAGCCCGAGTCCTTTGAAGAAGAAGCCGATTCCAAGGCAGAAGGTGGCGAGAGCTTTGATAACATAAACGGTTCATCCATAGCCGAGAACAATGACGATGGCGCGACCTCTCCTTCCAAGCAGCAACAACAGTTGAAGAAAAAGAAGAAGCCTTTGCTTGGCAAGTTTGGAAGCCTGCTCAAGAAAAAGGGTTCAAGCAACCAGAAATAG 2544 0.4285 MASKATKSNLSETPNKTSLATPRGSKLSRGVSKSESESPSPLQNLRHSIERSPRSVNSKPAATPDRKSPKLASNPPDKQPTRATKGSELQNQLNLVQEDLKKAKEQLIHAEKEKLKVINELKEAQRLAEEANEKLREALVAQKRAEEESEIEKFRAVELEQAGIESAQKKEEEWQKEIENVKSQHALDVAALLSTTEELQRVKQELAMTCDAKNQALNHADDATKIAEIHAEKAEILSAELTRLKALLDLKQETEASESNTILKLKAEVEALKQELAKAEDYDEKLAEKETTIEQLNVELEAARMAESYAHSVLEEWTKKVEELEMRVQEANKLEKSASESLENVMKQLEGSNDLLHEAESEVAALKEKVGLLEMTVGRQKADLEDSEHRINVAKEESLEMTHKVEALKSELETVKEEKIQALNNEKLAAASVQTLLEEKNQLINDLENSRDEEEKCKKAMESLTSALHEVSAEAREAKEKLLSSQAEHENYETQLEDLKSVLKATNEKYESMLDDARREIDVLTCNVENSKNDFENSRAEWEEREHQLVGCLKKTEEENSSLGKEINRLALLLKDTEDEASASREEEAQLKENLKEVEAEAINLQEALKEATAENVKLKENLLDKENELQSIIQENDELRTKEAESIKKVEELSKLLEEITARNHTQENGDLTDSEKDYDLLPKVVEFSEENGHGGEDVLKVEDSANQEVLKQGFQEETIPVNGKAEKIESPKHENGNGKLKEDDASKENDNSVEVEHKMWESCKIEKKELSPERDPEPESFEEEADSKAEGGESFDNINGSSIAENNDDGATSPSKQQQQLKKKKKPLLGKFGSLLKKKGSSNQK* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1188 847 Coils Coil 157 184 - -
Amo13g1188 847 MobiDBLite consensus disorder prediction 1 62 - -
Amo13g1188 847 Coils Coil 553 643 - -
Amo13g1188 847 MobiDBLite consensus disorder prediction 796 820 - -
Amo13g1188 847 MobiDBLite consensus disorder prediction 74 92 - -
Amo13g1188 847 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 11 844 - -
Amo13g1188 847 Coils Coil 430 534 - -
Amo13g1188 847 MobiDBLite consensus disorder prediction 711 847 - -
Amo13g1188 847 MobiDBLite consensus disorder prediction 1 92 - -
Amo13g1188 847 MobiDBLite consensus disorder prediction 724 777 - -
Amo13g1188 847 Coils Coil 314 425 - -
Amo13g1188 847 Coils Coil 86 152 - -
Amo13g1188 847 PANTHER WEB FAMILY PROTEIN-RELATED 11 844 - -
Amo13g1188 847 Coils Coil 255 306 - -
Amo13g1188 847 Pfam Weak chloroplast movement under blue light 87 631 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1188 Amo-Chr13 15482280 15486609 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1188 - - gmx:100777446 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1188 13 15482280 15486609 Amo13g1188 13 15482280 15486609 ECH