Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1182 AAAAGGAAAAAATCCAAAAAACTATCGGGTACCCGACCCGGACAAGATAAGACCCCCATAAACCCTAAAACCCTACAAACTGAAACTGCACACCTTCCCCTAACTACTCATTACGACAAGATCAATATGAATAACATGAAGGTTCCAAATGTTCCTGGTGGAGGGCTTTCTGCTCTGCTCAAAGTTAGTATCTTTGGTGGTCTTGCTGTGTATGGAGCTGCAAACAGCTTGTACAATGTTGAGGGAGGGCACCGAGCTATCGTCTTCAATCGCATTGTTGGTGTCAAAGATAAGGTCTATCCTGAAGGAACACATTTTATGATTCCTTGGTTCGAGAGGCCTGTGATCTATGATGTCCGTGCACGACCTCATTTAGTGGAGAGTACATCCGGAAGCCGTGATCTCCAAATGGTGAGAATTGGACTTAGGGTCCTTACCCGTCCTCTACCAAGTCATTTACCAACAATTTACCGAACCCTGGGTGAGAATTATAACGAGAGGGTCTTGCCTTCTATTATACATGAAACTCTGAAAGCTGTGGTTGCACAGTACAATGCCAGTCAGCTCATTACTCAGAGAGAGAATGTCAGTAGAGAAATAAGGAAGATCTTGACTGAAAGGGCCTCCCATTTCAATATTGCATTGGATGATGTGTCAATCACAAGCTTGACATTCGGTAAGGAATTTACAGCCGCAATTGAAGCCAAGCAGGTTGCTGCTCAAGAAGCTGAGAGGGCTAAGTTTGTGGTAGAAAAAGCTGAACAGGACAAAAGAAGTGCTGTTATTAGAGCACAGGGAGAAGCCAAGAGTGCACAATTGATTGGTCAAGCTATTGCCAATAATCCTGCATTTATCACCTTGAGGAAAATTGAAGCTGCAAGGGAAATCGCTCATACAATTTCAAACTCTGCTAACAAGGTTTACTTGAATTCAGATGACCTCTTGCTGAATCTTCAAGAGATGAATTTGGAGCCAGCGGGGAAGAGATAG 990 0.4354 KRKKSKKLSGTRPGQDKTPINPKTLQTETAHLPLTTHYDKINMNNMKVPNVPGGGLSALLKVSIFGGLAVYGAANSLYNVEGGHRAIVFNRIVGVKDKVYPEGTHFMIPWFERPVIYDVRARPHLVESTSGSRDLQMVRIGLRVLTRPLPSHLPTIYRTLGENYNERVLPSIIHETLKAVVAQYNASQLITQRENVSREIRKILTERASHFNIALDDVSITSLTFGKEFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREIAHTISNSANKVYLNSDDLLLNLQEMNLEPAGKR* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1182 329 Coils Coil 236 256 - -
Amo13g1182 329 Pfam SPFH domain / Band 7 family 79 254 IPR001107 -
Amo13g1182 329 PRINTS Prohibitin signature 120 136 IPR000163 GO:0016020
Amo13g1182 329 PRINTS Prohibitin signature 232 255 IPR000163 GO:0016020
Amo13g1182 329 PRINTS Prohibitin signature 138 157 IPR000163 GO:0016020
Amo13g1182 329 PRINTS Prohibitin signature 184 200 IPR000163 GO:0016020
Amo13g1182 329 PRINTS Prohibitin signature 161 179 IPR000163 GO:0016020
Amo13g1182 329 PRINTS Prohibitin signature 255 271 IPR000163 GO:0016020
Amo13g1182 329 PRINTS Prohibitin signature 207 226 IPR000163 GO:0016020
Amo13g1182 329 MobiDBLite consensus disorder prediction 12 28 - -
Amo13g1182 329 CDD SPFH_prohibitin 77 271 IPR000163 GO:0016020
Amo13g1182 329 Gene3D Band 7 domain 107 239 IPR036013 -
Amo13g1182 329 SUPERFAMILY Band 7/SPFH domain 108 244 IPR036013 -
Amo13g1182 329 PANTHER PROHIBITIN 42 327 IPR000163 GO:0016020
Amo13g1182 329 MobiDBLite consensus disorder prediction 1 28 - -
Amo13g1182 329 SMART PHB_4 76 237 IPR001107 -
Amo13g1182 329 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 42 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1182 Amo-Chr13 15384597 15387130 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1182 K17081 - gmx:100811958 524.628