Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1176 ATGATCCAGAACGCTGATATGGAACTTGAATCAGGGACTTGTAATATTTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAATCGAGCTCTAACTGGAACAAAGGCTGAAGAATGCTCTGATGAAAATTGTCGATCAGGGGAACCCAGTCAGTTTTCTATGGATGTGAGTGATCTATCTTCTCATAGGAGTACAGCTTGTGAAAGATTGAAGCATGCTGTCAGTGAAACCAGTAACTTGCTTAGTGTTAATTCTGGTCATGAATCTCTGTCTGAAAATGCTGAAACCACACAAACTTTATCAGAGAAGTATCACGATGCCAAGTGTTTAGAAGGACCTGATGACAGCTCTTCGTGTATCAGTAGAAACAGTAATGCTAATTTAGTTAGTGATAGCCATCAAAGAGATGCAGACAAAATAAATATTTCTTGTAGTTCATCCTCAGTTAGTCACTTAGGAGTAGAAGGATCTACAAGTGGGCCATCTGTTTATATATCAGGCTTGTGTGAGATACCCTCTTCTAAAGATGCAGATATGCCAGAGAATTCATCAGAATGCTGTGTTGGAAATGTTGAGTCATCGCCAACCAAGGAGATAATCACTGCTAATTTTTCAGGTGAAAAATTTCTTGCAAATAACAAAGGCCTTGTTAATGGCACTACTAGCAAGTTTTCGGCAAAAGTATATCCAAAGTCAGAAGCAGATAGTGACAATGGTGTTGGTGATGTGAAAGACGAAGATCGTAAAGTTCCAGCCCATGATGGACTGCACGAGAAGCAGGGGGAGCTTGTTAAATCACCCGTCAAGCCCGAAGCTCAATCTGGAGATGTGAGCGATGACTCAGATGTTGAGCATGATGTAAAGGTATGTGACATCTGTGGAGATGCTGGTCGCGAGGAGCTACTTGCAATATGTAGTAGATGCAGTGATGGTGCAGAGCACACCTATTGCATGCGAGAAATGCTCGAAAAGGTCCCAGAAGGTGACTGGTTATGTGAAGAATGCAAGTATGCTGAGGAGACTGAAAAACATCGGCTGGATGTTGAAGAGAAAAAGGTCCATAAAGTTTGTTCAACTGCGCAAATATCTGGTAAAAGGCCTTCCGAGGGTGAAGAATTGGCAAAGGCAGGGAAAAGGCAAGCTCTTGAATCAAGTAAAGGGTCACCAAAGGGGTCAAGCCCCAAGAAAATATTTCCACTGTCGCGAGAGTCTTCATTCAAGAGCATTGATAAAGGAAAGTTGAAGTCTGATCATCAGACCTCCATTTGTAACCACTCCAATGGCAATGACATAGAACTTGCTCGTTCTCTATCTGCTGGTCCTCGGAGTCAAACAGCTAAGAGTACATTGTTAAAGTCAAATTCATTCAACAACATCAATTCCAAGCCCAGAGTCAAACTTGTTGATGAAGTCCCGCAAAAGAAGAAAGGGGCTGGTGAACATACCTCTAAGAATATTGAAATGCCGGGACGAATGATAAGCAAATCTAGTTCATTGAAATCCTCAAATTTGGGCCATTCATGTGCCACTGAATCAAAAGTCAAAATGGTTACTTCCAAACCTGGAACTACTGCAGATCAAAAAGGATCAAAACTAGCAAAAGAATCAGGTGCCTCTGATAGGAAATTTTTCTCTAGGGTTGATCGGCCTGTTGTTTGTTCAACCATGGCTAGTTCTGCTCTTCTGACATCTAAGAGTGATCAGAAGCTTACCCCTCGTAGCGAAACTGCTAAACCTTCAACAATTAACAACAATCACGAATTTAAGGTCAACCAAGATGGGAGATCAAATTCATTATTGAAGTCTAAGAATAATACAAGCCAGAGAACATCAACCAGTGGTGATGAAACTCAATTAGATGGGCTGCCTCAATCAAGAGAGATAACAAATCAGGTTGATAAAACCAAAGGTAGTTCTGGTGATTGTGTGAGGTCTGGTCTTACTAATGCTTCTGAAAGCCCATTCTGTCACAAATGTAAGGATTTAGGCCATGCTACAGAATGTTGCATGGTTGATAAACAGGAATTTGGCCTGGAAGGATCAGCCACTGTCCCAAACAGTTCAAAAGACAAAACACATAAAGATAATAGACTGAAAGCTGCAATCCTGGCAGCTTTACTTAGAAGGCCCAAAATATGCAAGAGGAAAGAAGTGTCTGACCAAACTGAGAAGTTTCTTACATCAGCCATAGACATGAAGTCCGAAGTCACTTCTCAAGATAAGGCGTTTGTTATTGACACTCCAAAGAATATTGTTTCTACTGAAGAAACAAAAGTGAGGCAGGATATCCTTCAGAATCCTACATTTGAAATTTCGTCTTCCAATGATTCGAAGCAACATAGCTTTTGTCCAGCTGATTTTGGATCACAACCTAGAAAGTTAGAATCTGTTGGTCCTACTCCTGGAAATCCTGTAGTTAGAGACTTTCGCAATCAAGCTTTGGCTGTCTCAAGTGTTCTTCCAAAGATATCAGTCTTTCCAGAATATGAATACATTTGGCAAGGTGTCTTTCGAATGCATAGAAGCGGAAAGCCGCCTGACTTATGTACTGGTATTCAAGCGCATTTATCCACATGTGCTTCCCCTAAGGTTCTTGAGGTAGTGAACAAGATTCTTCCTGAGGTTTCCCTCAATGAAGTTTCTCGCTTGAGCACGTGGCCTACACAATTTCATCAAGGCGGGGCAAAGGAAGATAATATTGCACTTTACTTTTTTGCTAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTACTGGATCACATGATTAGAAATGATTTAGCGCTTAAAGGAATTTTTGATGGTGTTGAACTTCTTATATTCCCCTCCAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGTTGTTTTACTTATGGGGTGTATTTAGAGGGCAGAGGAGGAATAATTCTGATTCTGCAAAAAAGATTTGTAGTCCCAGTTTGAATGCGTTGCCAGTTCAGAAGGGTTCTCTGACTGCTGTGATGACTTTGTCTGAAACCCACTGTTCACCAATGCGGATGGATGAACAACCAATTTCTTGTGGTAAAACCTGCAGTGAAGTTCTCTCATCCACTTCCATGGACCAAGGCGATACTATTTTAAGTGGGGATTTTGATATTAAAGAAACTATTTTTGACCAGGCACGTTTGGGTCCACAAGTAAACTTACGGAGGCAAGATAGTAGAATCAACGCGGAATCTGCATCAAAGAATCCGACAAGCAGTGAACAATTGTGCCAACAAATGCACTCTCCAGGTTCACCTCCGAAAGATGGACAGCACAGAATCCCCACACCTCCTGAAGCAATGGGAACGCATGTAAGTAGCAGGATTTTGGAAACAAAAATTGATTTTGATATTTCAGTCAAGGAGAACTCTCTGTCTTCTGGGATTCCTTCTGCTGGCAAACAAGAGATAGATGCTGCAAGCAATACCTCAAAGAATCAAATTTCAGAAAGAACTAACAATGATGAAGATCAGCGAAGGCCTAAAAGGAAACTGATAGAAGAAGATCTCAATGTTAACATGGAGGCAACCTTTCAAGAAGACCCGACTATAAGAGGCACCAATTGTGAGCAAACCAATGATAAAAGAGTTGAGCATATAGATGTTTCAGATGCAGTTTTGAAGGCTTCCGCAGATAGTTATCAGAAATTGGAAGATGGAGAAACTTCCAGCAAGAAGCTCAAGTCAGGTTTCGGTGAAATTTATGCAAGTTGCAGTTCAGGTGGTAGGGAATCTTTCAATGGCAGTTTTACAGCCCCGGCAAACCATCCCGGTACCTTATCTTCGGTTGAGGGTAGAGGATGCAAAGAAGCTTGCTTAGATAAAGTCATTCATGAGGACCTTGGAACTATGGAAAGAACCTTCTTTCCTGTCGGTTTGCATCAGAAAAATGACTCACGCTTGATGCTTAATGGCATGCCAGTGGAGGGGCCTTGTGATTATGAGGGTCAATTTCAAGTTGGGATTCCAAACCTAGAGCTTGCTTTGGGGGGCGAAACAAAACCACAGCCACCGCCAGCACCGCCACTACCACCACGTAAGGGTATGTTCCCTTTTCTTGTCGGGGATGGTGACAAGAAAAATAACCAGGAAAAGCCACCTGAAGTAGTGGCGGATGAGAAAGAGGGTGATGACAGTGTTGCTGCATCTCTTTCCCTGTCTCTATCATTCCCATCTTCAAATAAGGAACCTGTCAAACCAGCTCCAAAAGCTGAACATTCGCCTGATGGGCATCATGTGAATACTTCGTTTCTCCTTTTTGGGAGATACACAGACAAATAA 4293 0.4188 MIQNADMELESGTCNICSAPCSSCMHLNRALTGTKAEECSDENCRSGEPSQFSMDVSDLSSHRSTACERLKHAVSETSNLLSVNSGHESLSENAETTQTLSEKYHDAKCLEGPDDSSSCISRNSNANLVSDSHQRDADKINISCSSSSVSHLGVEGSTSGPSVYISGLCEIPSSKDADMPENSSECCVGNVESSPTKEIITANFSGEKFLANNKGLVNGTTSKFSAKVYPKSEADSDNGVGDVKDEDRKVPAHDGLHEKQGELVKSPVKPEAQSGDVSDDSDVEHDVKVCDICGDAGREELLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAEETEKHRLDVEEKKVHKVCSTAQISGKRPSEGEELAKAGKRQALESSKGSPKGSSPKKIFPLSRESSFKSIDKGKLKSDHQTSICNHSNGNDIELARSLSAGPRSQTAKSTLLKSNSFNNINSKPRVKLVDEVPQKKKGAGEHTSKNIEMPGRMISKSSSLKSSNLGHSCATESKVKMVTSKPGTTADQKGSKLAKESGASDRKFFSRVDRPVVCSTMASSALLTSKSDQKLTPRSETAKPSTINNNHEFKVNQDGRSNSLLKSKNNTSQRTSTSGDETQLDGLPQSREITNQVDKTKGSSGDCVRSGLTNASESPFCHKCKDLGHATECCMVDKQEFGLEGSATVPNSSKDKTHKDNRLKAAILAALLRRPKICKRKEVSDQTEKFLTSAIDMKSEVTSQDKAFVIDTPKNIVSTEETKVRQDILQNPTFEISSSNDSKQHSFCPADFGSQPRKLESVGPTPGNPVVRDFRNQALAVSSVLPKISVFPEYEYIWQGVFRMHRSGKPPDLCTGIQAHLSTCASPKVLEVVNKILPEVSLNEVSRLSTWPTQFHQGGAKEDNIALYFFAKDIESYERHYKGLLDHMIRNDLALKGIFDGVELLIFPSNQLPENSQRWNMLFYLWGVFRGQRRNNSDSAKKICSPSLNALPVQKGSLTAVMTLSETHCSPMRMDEQPISCGKTCSEVLSSTSMDQGDTILSGDFDIKETIFDQARLGPQVNLRRQDSRINAESASKNPTSSEQLCQQMHSPGSPPKDGQHRIPTPPEAMGTHVSSRILETKIDFDISVKENSLSSGIPSAGKQEIDAASNTSKNQISERTNNDEDQRRPKRKLIEEDLNVNMEATFQEDPTIRGTNCEQTNDKRVEHIDVSDAVLKASADSYQKLEDGETSSKKLKSGFGEIYASCSSGGRESFNGSFTAPANHPGTLSSVEGRGCKEACLDKVIHEDLGTMERTFFPVGLHQKNDSRLMLNGMPVEGPCDYEGQFQVGIPNLELALGGETKPQPPPAPPLPPRKGMFPFLVGDGDKKNNQEKPPEVVADEKEGDDSVAASLSLSLSFPSSNKEPVKPAPKAEHSPDGHHVNTSFLLFGRYTDK* 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1176 1430 SUPERFAMILY FYVE/PHD zinc finger 276 341 IPR011011 -
Amo13g1176 1430 PANTHER - 7 1173 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 237 265 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 1334 1430 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 563 625 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 496 541 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 1129 1153 - -
Amo13g1176 1430 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 241 360 IPR013083 -
Amo13g1176 1430 SMART PHD_3 289 336 IPR001965 -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 1338 1352 - -
Amo13g1176 1430 ProSiteProfiles Zinc finger PHD-type profile. 287 338 IPR019787 -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 1362 1383 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 1057 1108 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 1129 1166 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 1059 1089 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 770 799 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 231 281 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 770 784 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 496 530 - -
Amo13g1176 1430 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 1173 - -
Amo13g1176 1430 PANTHER - 1175 1421 - -
Amo13g1176 1430 MobiDBLite consensus disorder prediction 361 427 - -
Amo13g1176 1430 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1175 1421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1176 Amo-Chr13 15286952 15294466 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1176 - - adu:107477384 2126.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1176 13 15286952 15294466 Amo13g1176 13 15286952 15294466 ECH