Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1169 ATGAAGTTTGATCTTACATGGATTTCTTATGTTTCAGAATTCCCTGAAAAATTTTCCTCATGCAGATTATTGCCATATCATGTTGTGGCAGACTATGAAGCAGAAGAGGATGATAGGATACTGGATTCTGACACCACTGGCCAGATGCTTTCACGGTCCCAGCAGTGGGATAATAATATTGCTGCTAAAATTGCTGAGTTCACAGCAACTTTTGAGAAGCAGGCACTTGCCTTCAACATAATAACCCAAAAAAGAGGTTTGGGGGAATTCCGATCTGAGGAGAGATTGATGTTTGAGCAGGCACTTCTTCAGGAGGAAAAGCGAGCTATGTTGGAATTAAGAGCTGAACTAGAGTCCAGGGAGAAGGCTGGTCGTGAAGCCCACGAGGCTAAACTTCGGATGGCAATGGTCCAGGCAGAGCAGGCTCGGGCTGATTCACAGTCTCATGCTGAAATGATGTCTCGAACCCCAATAAGAGGGAGTGCACTTGGGTCCCAAGGGAGCGACATCGCAATTGGTCATGACATGAGAGAGCAGGATCAGGGAGGCAATGCAGGTGAGATGATGAATGGATGGGGAAACAATGCTCAGAGAGAAGAGAAGGAGCCATCTGATGATTTCTTAAATGATGAAGCTGAAAATGGGGACACCGGCACGCAGGATGGCTGGCGTGATGTTGGTGAATTTGATCTGAATGCTAGGTGA 705 0.4652 MKFDLTWISYVSEFPEKFSSCRLLPYHVVADYEAEEDDRILDSDTTGQMLSRSQQWDNNIAAKIAEFTATFEKQALAFNIITQKRGLGEFRSEERLMFEQALLQEEKRAMLELRAELESREKAGREAHEAKLRMAMVQAEQARADSQSHAEMMSRTPIRGSALGSQGSDIAIGHDMREQDQGGNAGEMMNGWGNNAQREEKEPSDDFLNDEAENGDTGTQDGWRDVGEFDLNAR* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1169 234 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT-LIKE PROTEIN 21 234 - -
Amo13g1169 234 Coils Coil 96 123 - -
Amo13g1169 234 MobiDBLite consensus disorder prediction 178 234 - -
Amo13g1169 234 Pfam Conserved region of unknown function on GLTSCR protein 22 114 IPR015671 -
Amo13g1169 234 Coils Coil 125 145 - -
Amo13g1169 234 PANTHER GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1 21 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1169 Amo-Chr13 15192030 15193390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1169 - - adu:107477389 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1169 13 15192030 15193390 Amo13g1169 13 15192030 15193390 ECH