Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1164 ATGGGTTCAGCACCAGAATTGTCCCTTAAGAGAAGTTCTAGTAAGCTACTTGGAATTAGGGCCATTGAATACTTGAAAGGTGGTCCTGTTTCCTTCAAAACCCACCAAGCAATTGTTCTGATTGTAACATTTTTGGCTTATACTAGTTACCATGCCACCAGAAAAACCACAAGTATTGTGAAGAGTGTTCTTGATCCTCAATCATCAGATATAGGATTGAGTCTCCCGAAAAAGAACAGAATTTCTTCAAGTGTTCTTGGTAATGGTTGGGCACCATTCAATGAATCAGATGGGACTTCCCTTCTTGGTGATGTGGATGTTGCATTCCTTTCCTTTTACGCATTGGGGATGTACTTTTCAGGACACTTTGGCGATCGATGTAATTTAAGGATTTTTCTTACTGTGGGAATGCTAGGAACTGCTTTGTTCACTTCACTATTCGGGGTAGCTTATTGGGCAAACATTCATAACTTTTACTATTTCTTAGTGGTTCAAATGATTGCTGGATTGTTTCAATCAACCGGATGGCCTTCGGTTGTTGCAGTTGTCGGAAACTGGTTTGGAAAGAGCAAGAGAGGGTTGATCATGGGAATATGGAATGCTCACACGTCTGTTGGGAACATCACAGGATCCTTAATTGCTTCAGCTATGTTGTGTAATGGATGGGGATGGTCCTTTGTTGTGCCAGGACTTATGATGGCTTTCGTCGGCTTGATGGTTTTCTTTCTATTGCCGGTTGCACCTGAGTCTGTGGGAGTTAGCAGAGAGGAAGATGAGTGTAATTCACCCAAGAAAAGTGGAGATGAAGAAGTGAACGAGCCTCTCTTAGCGCCGGAGAATCCGGCCGAGGAAGAACCAGTTGGCTTCCTTGAGGCCTGGAAAATACCTGGGGTTGCCCCTTTCGCACTCTGTCTGTTTTTCGCCAAATTGGTTGCATATACATTTCTTTATTGGCTCCCCTTCTATGTTAGCCACACAGCAATTGATGGGAAATATCTATCCAGTGAGACATCAGGGACATTATCGACTTTATTCGATGTTGGTGGGGTTCTTGGAGGGATTCTAGCCGGCCACATTTCCGATCACTTAGATGCTAGAGCCATAACAGCAGCTAGCTTCATGTATTGTGCTATACCTGCTCTGTTCTTCTACAGAAGCTATGGTCATGTTTCATTGATTGTGAATGCTGCATTGATGTTCATAACCGGTATGTTTGTGAATGGCCCTTATGCCCTCATAACAACCGCTGTTTCGGCTGACCTGGGAACACATAAGTCATTGAGGGGGAATTCGCGAGCTCTAGCAACTGTCACGGCTATCATCGACGGAACAGGTTCTATTGGGGCTGCAATAGGACCTCTATTGACCGGTTATATATCGGCCAAGAGCTGGAGTGCAGTTTTCACAATGTTGATGATAGCAGCTTTAATTGCAGGGCTGCTTCTTACTAGGCTTGTAATGGCTGAGGTGGCTGCAAAGATCGAAGAGTCGAGGTCCAACAGAGCACCGGAATGCTCCCTCGATGTTTAA 1530 0.4458 MGSAPELSLKRSSSKLLGIRAIEYLKGGPVSFKTHQAIVLIVTFLAYTSYHATRKTTSIVKSVLDPQSSDIGLSLPKKNRISSSVLGNGWAPFNESDGTSLLGDVDVAFLSFYALGMYFSGHFGDRCNLRIFLTVGMLGTALFTSLFGVAYWANIHNFYYFLVVQMIAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSVGNITGSLIASAMLCNGWGWSFVVPGLMMAFVGLMVFFLLPVAPESVGVSREEDECNSPKKSGDEEVNEPLLAPENPAEEEPVGFLEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAIDGKYLSSETSGTLSTLFDVGGVLGGILAGHISDHLDARAITAASFMYCAIPALFFYRSYGHVSLIVNAALMFITGMFVNGPYALITTAVSADLGTHKSLRGNSRALATVTAIIDGTGSIGAAIGPLLTGYISAKSWSAVFTMLMIAALIAGLLLTRLVMAEVAAKIEESRSNRAPECSLDV* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1164 509 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 491 IPR020846 GO:0022857
Amo13g1164 509 CDD MFS_SLC37A1_2 36 489 IPR044740 GO:0061513
Amo13g1164 509 Gene3D MFS general substrate transporter like domains 30 259 IPR036259 -
Amo13g1164 509 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 1-RELATED 1 501 - -
Amo13g1164 509 Pfam Major Facilitator Superfamily 101 422 IPR011701 GO:0022857|GO:0055085
Amo13g1164 509 SUPERFAMILY MFS general substrate transporter 98 486 IPR036259 -
Amo13g1164 509 PIRSF Hexose_phosphate_transp 24 503 IPR000849 GO:0016021|GO:0022857|GO:0055085
Amo13g1164 509 Gene3D MFS general substrate transporter like domains 293 500 IPR036259 -
Amo13g1164 509 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 1 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1164 Amo-Chr13 15129210 15132507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1164 1 508 Organic Solute Cotransporters AT3G47420 71.318 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1164 K13783 - gmx:100799211 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1164 13 15129210 15132507 Amo13g1164 13 15129210 15132507 ECH