Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1163 ATGGCGTCCTCTCTTGCAGTGAAGCGTTTCCTCTCCTCTCCCCTCATTTCCAAGTCTTTGCTTCGTCCAGCTGCTGCTTCCGCTTCCCGCTCCTTCAACACCAATGCCATGCGCAACTACGACGACTCAGCAGATGACCGCAACCTCGACGTCGAACGTCGCTCCGATCGTACTCTCCCTCGCGCTCCTCGCCGCGACGATTTCCTCTCAGATGTGTTCGATCCATTTTCTCCGACTAGGAGCTTGAGCCAGGTTCTGAATATGATGGATCAGTTCATGGAGAATCCGTTCCTCTCTGCTTCTCGTGGAGCGGGAGCTGGACTTCGTCGTGGTTGGGACGCGCGTGAGACGGAAGATGCACTGCTTCTGCGCGTGGACATGCCTGGTCTCGGAAAGGAGGATGTCAAAGTTTCCGTGGAGCAGAACACCCTGACCATAAGAGGTGAAGGTGGTAAAGAAGGCGAAGACGAAGAAAGCGCGCGTAGGTACACCGGGAGGATCGACTTACCTGATAGGCTTTTCAAGATTGATCAGATCAAAGCTGAGATGAAGAACGGCGTGCTTAAGGTCGTTGTGCCTAAGATGAAGGAGGAAGAGAGGAGTGACGTGTTCAGTGTCAAGGTTGATTAG 630 0.5365 MASSLAVKRFLSSPLISKSLLRPAAASASRSFNTNAMRNYDDSADDRNLDVERRSDRTLPRAPRRDDFLSDVFDPFSPTRSLSQVLNMMDQFMENPFLSASRGAGAGLRRGWDARETEDALLLRVDMPGLGKEDVKVSVEQNTLTIRGEGGKEGEDEESARRYTGRIDLPDRLFKIDQIKAEMKNGVLKVVVPKMKEEERSDVFSVKVD* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1163 209 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 208 - -
Amo13g1163 209 Pfam Hsp20/alpha crystallin family 114 208 IPR002068 -
Amo13g1163 209 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 103 209 IPR002068 -
Amo13g1163 209 MobiDBLite consensus disorder prediction 36 63 - -
Amo13g1163 209 MobiDBLite consensus disorder prediction 40 63 - -
Amo13g1163 209 CDD ACD_sHsps-like 113 194 - -
Amo13g1163 209 SUPERFAMILY HSP20-like chaperones 78 199 IPR008978 -
Amo13g1163 209 Gene3D - 68 208 IPR008978 -
Amo13g1163 209 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 208 IPR044656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1163 Amo-Chr13 15108971 15110378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1163 K13993 - gmx:547852 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1163 13 15108971 15110378 Amo13g1163 13 15108971 15110378 ECH