Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1159 ATGATGCTGGATTTGGGTCCGTTCTCAAGCGAGAACTACGACTCTAAGAAATGGATCAACGCCGCTTGCCAGAGCCGTCACCCGCAGGAGCCAGTCGACAAGCACTTTGTCGACATGGAGATGAAAATCCAGATGGTCTCCGAGGAGATCGCCGCCTCCCTCGAGGAACAGAGCGCCGGCGCTCTCCTCCGAGTCCCCCGTGCCACCCGTGACGTCATCCGACTCCGTGACGATGCCGTTTCTCTCCGCTCCGCCGTCTCCGCCATCCTCCAGAAGCTCAAGAAGGCAGAGGGATCGTCCGCTGAATCTATAGCAGCCCTTGCTAAAGTTGACGTTGTCAAGCAGAGGATGGAAGCTGCTTATGAGACATTGCAGGATGCTGCTGGATTAACTCAATTAAGTTCAACTGTGGAGGATGTATTTGCTAGTGGTGATCTCCCTCGTGCTGCAGAAACTCTGGCTAATATGAGACATTGCTTGTCTGCTGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTTGAAGTCTTGGAAGATAGGCTAGACACGATGGTGCAGCCCCGCCTTACTGATGCATTATCGAATCGCAAGGTTGATGCTGCCCAAGATTTGCGGGAAATTCTAATCAGAATTGGGAGATTTAAGTCTTTAGAATCGCAATACACAAAGGTTCACTTAAAACCAATAAAGAAGCTCTGGGAAGATTTTGACTCAAAAGACCGAGCCAATAAGTCTGCAAATGAGAAGAACGAAATGGAGAGGATATCAAGTAGTGGTGATTTTCAGTCAGCTTTGCCAACAATATCGTTCTCCAGTTGGTTGCCAAACTTTTATGATGAACTACTACTTTATCTTGAACAAGAATGGAAATGGTGTATGATTGCTTTTCCAGAAGATTATAAAACTCTAGTCCCAAGGCTACTAAGTGAGACTATGATGTCTATAGGTTCCAGTTTCGTATCTCATATCAATGTTGCCATTGGAGATGCTGTTCCTGAAACGAAAGCACTTGCTAAAGGCTTATTGGATATATTATCTGGAGATATGCAAAAGGGCATTAAGATTCAGACTAAGCATCTAGAGGCATTGATTGAATTACACAACATGACGGGTACATTTGCAAGGAATATTCAACACTTATTTTCGGATTCTGATGTCCGAGTTTTAATAGATGTCCTGAAAGCTGTGTACTTGCCATATGAATCATTTAAACAGAGGTATGGACAAATGGAGCGTGCCATCCTTTCCTCAGAGATTGGAGGAGTAGATTTAAGAGGAGCTGTTATTCGAGGTGTGGGAGCCCAAGGAGTAGAACTCAGCGAAACAGTTCGCAGGATGGAGGAGTCTATTCCGCAAGTTATTATACTTCTTGAAGCAGCTGTGGAGAGATGCATCAACTTCACTGGAGGTTCTGAGGCAGATGAGCTAATTCTTGCTCTTGATGACATAATGTTACAGTACATTGCTACTCTGCAAGACACTCTCAAGTCACTAAGAACTGTATGTGGTGTCGATTATGGTAGTGATGGTACAATAAAGAAGGAAACGGAGAAGAAGGATGGAAACCCAAATGCTCGAAGAGTTGATTTGATCTCAAATGAAGAGGAGTGGTCCATAGTTCAAGGGGCATTGCAAATCCTGACAGTTGCAGATAGTTTGACAAGCAGGTCTTCTGTATTTGAAGCATCTTTGAGAGCTACACTTGCTAGATTGAGCACGAGTCTATCCTTTTCAGTATTTGGTTCAAGTTTAGACCAAAACCAGACAATAAGAAGTAGTAATGAAGATGGGGAGCCATATTTTGGTGGAAGGGCTGCCTTGGATATGGCAGCTCTGCGGCTTGTTGATGTGCCGGAAAAGGCTAGGAAACTCCTTAACCTTTTGAATCAGTCTAAAGATCCCCGATTTCATGCACTTCCTCATGCATCTCAAAGAGTTGCAGCATTTGCTGATACAGTGAATGAACTTGTATACGACGTCCTCATATCTAAAGTACGGCAACGCCTCAGTGATGTGTCCCGATTGCCAATTTGGTCATCAGTAGAGGAGCAAAGTGCTTTTCATCTTCCTACCTTCAGTGCATATCCACAGTCCTATGTGACCAGTGTTGGTGAATACCTTCTTACTCTACCCCAACAATTGGAGCCACTTGCTGAGGGAATCTCTAGCAGTGAAAACAATGATGAAGCTCAGTTCTTTGCAACTGAATGGATGTTCAAGGTCGCAGAAGGGGCAACAGCACTGTACATAGAGCAATTGCGTGGGATTCAGCACATTTCGGATCGTGGAGCGCAACAGCTGTCAGTTGATATTGAGTATCTTAGTAATGTGCTATCCGCTTTGTCGATGCCAATCCCCGCGGTTTTGGCCACATTCCAAAGTTGTCTCTCTGCGTCAAGGGACCAGTTAAAAGATCTTCTCAAGTCAGATTCAGTAGATATGCCAACAGCAAACCTTGTGTGCAAGATGCGGCGAGTGAATTTAGATTCATGA 2499 0.4478 MMLDLGPFSSENYDSKKWINAACQSRHPQEPVDKHFVDMEMKIQMVSEEIAASLEEQSAGALLRVPRATRDVIRLRDDAVSLRSAVSAILQKLKKAEGSSAESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDTMVQPRLTDALSNRKVDAAQDLREILIRIGRFKSLESQYTKVHLKPIKKLWEDFDSKDRANKSANEKNEMERISSSGDFQSALPTISFSSWLPNFYDELLLYLEQEWKWCMIAFPEDYKTLVPRLLSETMMSIGSSFVSHINVAIGDAVPETKALAKGLLDILSGDMQKGIKIQTKHLEALIELHNMTGTFARNIQHLFSDSDVRVLIDVLKAVYLPYESFKQRYGQMERAILSSEIGGVDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEAAVERCINFTGGSEADELILALDDIMLQYIATLQDTLKSLRTVCGVDYGSDGTIKKETEKKDGNPNARRVDLISNEEEWSIVQGALQILTVADSLTSRSSVFEASLRATLARLSTSLSFSVFGSSLDQNQTIRSSNEDGEPYFGGRAALDMAALRLVDVPEKARKLLNLLNQSKDPRFHALPHASQRVAAFADTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQSAFHLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISSSENNDEAQFFATEWMFKVAEGATALYIEQLRGIQHISDRGAQQLSVDIEYLSNVLSALSMPIPAVLATFQSCLSASRDQLKDLLKSDSVDMPTANLVCKMRRVNLDS* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1159 832 Pfam Golgi complex component 7 (COG7) 4 827 IPR019335 GO:0006886|GO:0017119
Amo13g1159 832 Coils Coil 830 832 - -
Amo13g1159 832 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 1 826 IPR019335 GO:0006886|GO:0017119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1159 Amo-Chr13 15075660 15081023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1159 K20294 - gmx:100794449 1448.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1159 13 15075660 15081023 Amo13g1159 13 15075660 15081023 ECH