Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1158 ATGGATGCTCAGAGAGCTCTTCTTGACGAACTCATGGGTTCAGCTCGCAACTTGACGGAGGAAGAGAGGAAAGGATACAAAGAAGTGACGTGGGACGATAAGGAAGTGTGTGGATTCTACATGGTGCGGTTTTGCCCTCATGATCTCTTTGTCAACACCCGCAGCGATCTTGGACCTTGCCCAAGAATACATGATCCGAAGTTGAAAGAAAGCTTTGAGAATTCCCCAAGACATGATGCATTCGTACCCAAATTTGAAGCTGACCTTGCTCAGTTCTGTGAGAAATTGGTAATGGACTTGGATAGAAGAGTAAGACGTGGGCGAGAACGCCTTGCTCAAGAGGTGGAGCCAGCACCAGCGCCTCCATTGACTACTGAAAAGTCTGAACAGCTATCGGTGCTGGAGGAGAAGATAAAGAATCTTCTGGAACAAGTTGAATCTTTAGGTGAAGCTGGGAAGGTTGATGAAGCTGAAGCTCTTATGAGGAAGGTGGATGCACTCAATGTTGAGAAAACGGCATTAACACAGCCTCAAAATGATAAGGTGTTGATGCTTGGTCAGGAYAAGAAGATGGCACTKTGTGAGATATGTGGTTCTTTTCTTGTGGCAAATGATGCTGCYGAAAGGACTCAGTCCCATATTACTGGGAAGCAACATGTTGGTTATGGCATGGTTCGCGATTTCATATCCGAATACAAGGCTGCCAAAGAGAAGGCRGTTGAAGAAGAAAGATTAGCRCGGGAAAAAGAGGCAGAAGAGCGAAGGAAACAGAGGGAGAAGGATCATGAGAGAAGACGACGAAGTGATTCAAGTGATAGGGACAGGCATCGGGATAAAGATCGAGATAGGGACAGGGATAGGTACAGAGATAGAGACCTAGATCGTGAAAGGTCTCGGGAGCTGGATGGTAGAGGTAATCGAGATGGGGGAAGGGGCATGGATTCTAGGTTGAGGAATGGAAGAAATGGAGGCAGAGACAGGTACCGCAACAAAAGCAGGTCACGCTCCCCCGTTAGGCACAACTACAGGCGGCACTCCTGA 1041 0.4736 MDAQRALLDELMGSARNLTEEERKGYKEVTWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCPRIHDPKLKESFENSPRHDAFVPKFEADLAQFCEKLVMDLDRRVRRGRERLAQEVEPAPAPPLTTEKSEQLSVLEEKIKNLLEQVESLGEAGKVDEAEALMRKVDALNVEKTALTQPQNDKVLMLGQDKKMALCEICGSFLVANDAAERTQSHITGKQHVGYGMVRDFISEYKAAKEKAVEEERLAREKEAEERRKQREKDHERRRRSDSSDRDRHRDKDRDRDRDRYRDRDLDRERSRELDGRGNRDGGRGMDSRLRNGRNGGRDRYRNKSRSRSPVRHNYRRHS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1158 346 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 345 IPR004882 GO:0003729|GO:0005685|GO:0006376
Amo13g1158 346 MobiDBLite consensus disorder prediction 332 346 - -
Amo13g1158 346 Pfam LUC7 N_terminus 2 249 IPR004882 GO:0003729|GO:0005685|GO:0006376
Amo13g1158 346 Coils Coil 229 266 - -
Amo13g1158 346 Coils Coil 1 21 - -
Amo13g1158 346 MobiDBLite consensus disorder prediction 239 331 - -
Amo13g1158 346 MobiDBLite consensus disorder prediction 239 346 - -
Amo13g1158 346 Coils Coil 124 151 - -
Amo13g1158 346 PANTHER ARGININE-ASPARTATE-RICH RNA BINDING PROTEIN-LIKE 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1158 Amo-Chr13 15061257 15065206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1158 - - gmx:100792348 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1158 13 15061257 15065206 Amo13g1158 13 15061257 15065206 ECH