Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1154 ATGTCGTGTTCGTCGCCTGGCCTCTGTCTCCGTCGCGCTTCTGCCCCTCTGCTCAGACTGCTCAGAAGAAAAACACTTCTCCGTTCCGATTTCCTTCCTTCGAGTTTAGAGAGCAGAAGCTCAACCAAGAAAAAAACCCGAGACTTCGAAGAATGTGGGGTAGCTGACAACAACAAAGCTTCAAACCAGAATAATATAATAGTGTGCCCTTTGTTGAAATCTTTACCATTTTGCAAGGATAAGGAAACAAACTTAAGATCCATGTGGAATGAGTTCAGGTGGAGACACAAAGCTCAATCCAAGATATATTTCTACCCTCGAATGAGCTTACATCTTCTTGTGATGGATCATCACTTGGCTAGTGATTCTCCGCAGGTTCGTCCTAGATGGAGGAAAGTAGCATATGGCGGTATGCAACCTGGTTTTGATGACAATCATACCGATGAATCTTTCCTTGAAGGAATGGTCATGAATGCCAATGTTGTAAGAAGGGACATGCTAAAGGTGATGTTAGACTCTGTTTCCATTTCTGAATACTTATGCATTGTAGCTCTTGTTGTCTTAGTATGGACCTACACACTAGAATCAACCATTGATGAGAGTCGTCTTCTGTGCATAGATGTTAGTCTTCTAGTTTTGGGTTTCTTGATTCTCCTTTTCACTCAGGAAAAGATTTCCCTTAGCATCCTTGTTCATCATTATTTCCTCAATATCTCGTTTTTCATAATGGGATTATATGTTTTGGCACCCATCTACCAAACCCTTACAAGATCGATCAGTTCTGATTCCATTTGGGCGTTAACTGTATCGCTTCTCGTGATTCACCTTTTCCTGCATGACTATTCGGAATCAACTGTCAATGCACCGGGAGCTCTCAAAAATCCTGCATTGACCAGTTGCATCTCTGTAAATGCTTCTGTAGTTGCCTCTGTATTCATTGCTTCTCGCCTTCCGTCGAGACTACATGTTTTTGCCATCATGCTATTCTCCTTGCAAGTTTTCCTATTTGGTCCCCTGGTTACTTACTGCATTAAGAAATATTCGTTCCGTTTACACCTGTGTTTTTCMATCAGTTTGATGGTTGTGACATTAAGATTCGTGTACATGCTGCATTGCTTACTTTTCGTGTTGTTGCTTAGTTTGCTGGTTTTTGTCAATGTGGTCTGCCCTTATTGGCTTATACGGATCCAGGAGTACAAGTTTGAGATCAATGGACCTTGGGATGAGGCTAAGCTTTGTTTTGCTATTACAGATTGA 1257 0.4161 MSCSSPGLCLRRASAPLLRLLRRKTLLRSDFLPSSLESRSSTKKKTRDFEECGVADNNKASNQNNIIVCPLLKSLPFCKDKETNLRSMWNEFRWRHKAQSKIYFYPRMSLHLLVMDHHLASDSPQVRPRWRKVAYGGMQPGFDDNHTDESFLEGMVMNANVVRRDMLKVMLDSVSISEYLCIVALVVLVWTYTLESTIDESRLLCIDVSLLVLGFLILLFTQEKISLSILVHHYFLNISFFIMGLYVLAPIYQTLTRSISSDSIWALTVSLLVIHLFLHDYSESTVNAPGALKNPALTSCISVNASVVASVFIASRLPSRLHVFAIMLFSLQVFLFGPLVTYCIKKYSFRLHLCFSISLMVVTLRFVYMLHCLLFVLLLSLLVFVNVVCPYWLIRIQEYKFEINGPWDEAKLCFAITD* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1154 418 PANTHER PHOSPHATIDYLINOSITOL GLYCAN, CLASS C 64 417 IPR009450 GO:0006506|GO:0016021
Amo13g1154 418 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT C 64 417 - -
Amo13g1154 418 Pfam Phosphatidylinositol N-acetylglucosaminyltransferase 130 408 IPR009450 GO:0006506|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1154 Amo-Chr13 14988678 14992668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1154 115 418 Lipid Metabolism Gene Families AT2G34980 75.000 1.05e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1154 K03859 - gmx:100796558 494.582