Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1115 ATGAGGGGTCAGAGAATGTCGATCCACTCCATGACCACGTGGCTCAAGCGGCAGCCACCAAAGGTGAAGGCTTTCCTCGCCGTGATTTCCGGCATGGCGGCGCTTGTTCTGCTCCGCTTCATCGTCCACGACCACGACAACCTATTCGTCGCCGCCGAGGCTGTTCACTCCCTGGGCATCTCTGTTCTCATCTATAAGCTCATCAAGGAGAAGACCTGCGCCGGATTGTCACTCAAGTCCCAGGAATTAACAGCTATCTTTTTAGCTGTTAGGCTGTACTGTAGTTTTGTCATGGAATATGATATACACACACTACTCGATTTCGCTACTTTCGTAACTACAATGTGGGTCATATACATGATTCGGTTCAAACTGAAGGCTAGTTACATGGAAGAGAAGGATAACTTTGCGATATACTATGTGGTGATACCCTGTGCTGTGTTGGCCTTGCTTATTCATCCATCAACTTCTCATCATTTATTGAACAGGATTTTCTGGGCATTCTGTGTATATCTGGAAGCAGTTTCGGTATTACCTCAACTGCGGGTCATGCAGAACACCAAAATTGTTGAGCCATTCACTGCTCATTATGTATTTGCGCTGGGCGTTGCAAGATTCCTTAGCTGTGCTCATTGGGTTCTTCAGGTATTAGATACCCGTGGACATTTGTTGGTTGCCTTGGGGTATGGTTTATGGCCACCGATGGTTCTTATATCAGAAATTGTCCAGACCTTCATCCTAGCAGATTTCTGTTACTACTATGTCAAAAGTGTTTTTGGAGGTCAGCTTGTTCTTCGTCTTCCCTCTGGAGTGTATCACACAACACACCTCTATGACAACAATAACAACATTGCATCACAGCTTGTTTCAAAGCATCGACGTCTTGGAGAGAGGGGCAGGAGGAGTCCAGCACGTGAAGGGCGTCCCAGGAGTGAAGACGCCTTGGACGACGTCTTGGAGTGCTGA 966 0.471 MRGQRMSIHSMTTWLKRQPPKVKAFLAVISGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLIKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDFATFVTTMWVIYMIRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHLLNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPPMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVYHTTHLYDNNNNIASQLVSKHRRLGERGRRSPAREGRPRSEDALDDVLEC* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1115 321 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo13g1115 321 MobiDBLite consensus disorder prediction 299 316 - -
Amo13g1115 321 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo13g1115 321 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo13g1115 321 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo13g1115 321 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo13g1115 321 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Amo13g1115 321 MobiDBLite consensus disorder prediction 292 316 - -
Amo13g1115 321 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1115 Amo-Chr13 14122784 14125791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1115 5 271 Miscellaneous Gene Families AT2G21190 85.393 1.34e-173 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1115 - - gmx:100803652 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1115 13 14122784 14125791 Amo13g1115 13 14122784 14125791 ECH