Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1101 ATGTGGAAGGGTGTATGTTCTTTTTCCTTGAATAATGTCCAAGAGATCGATGCACTAGTTTCTACTTTCAGTGGTTTTGAAATGAATGAAGCTGGTCCTCTTGTTCTAGCTTGGGCAGTATTTCTTTATCTGCTCTTGACACTTCCGGGTAAAAATGGGACCAATGAGCTAATGGAGATTGATCACATTGGTTATGTTCGTCAAGCCTTTGAGGCTGGATTCTTACGTTACTGTCTTGAAATTCTTGAGTGTGACATCTTCAAGGAGTATGATGGCCCAGCGTCTGGTTATCGCAGTGTTTTGAGGACATTCATATCTGCATTTATTGCATCTTATGAGGTCAACCTTCAGCTAGAGGACGGTAACCCTGCTTTGATACTGGATATTCTTTGCAAGATCTACCATGGAGAGGAGTCACTATGTACTCAGTTTTGGGACAAGGAAAGTTTTATTGATGGTCCAGTTCGGTGTCTTCTTTACAACCTGGAGAGCGAGTTCCCTGTCAGGACTCTTGAACTTGTACGGCTCTTGTCTTCCCTTTGTGAAGGCACTTGGCCTGCAGAATGTGTGTATAACTTTCTAGATAAGTCTGTTGGTGTATCATCCTTGTTCGAGATTAGCAGTGATTCACAGGTAGATGATGCCTCTCATATGGTTGAGGCACGACAGGCAGTGCAAGTTCCTGGAGTTGAGGGTTTTTTTATTCCTCCTGGTACTCGTGGGCGTGTCTTGAAATTTGTTGGAGAGGATACTGCCCTCGTGCGATGGGAGTATGCTCCATCTGGGGTGTTTCTTTTGCTCCTACGTTTGGCCCAAGATGTGTACTTGAATAACAAGGAGGAAGTTCTTTGCACGCTTGACCTGCTCAGCAGATTGGTGGTGGTTGAGATCATCTGTAATCTGGTTAAAAACCTGCCTCTGAATTCCTGTAGTGCTGCACTTATGTCAATGGCCATCAAGATCTTGGTGACTATTTCTCCAGCTAATGTTACAACAGTTGCTTTAAATGCAAATCTATTTGATATCAATTTGCAGACTGCCGTGTTCAGTGTAGGCAACAATGGCTTCTCAAGTGGGTCATGGTTGCTTTCCAGCAAACTGGCAAGGATGATTTTAACTGATTGTGAGATGAACAGTAGTGACTGCCCCTTGGCAATATCAGTGCTGGACTTCACCATACAGCTTGTAGAGACAGGGGTGGAGAATGATGCTCTCCTGGCACTGATCATTTTCTCTGTACAATTTGTCCTAGTCAATCACCAGTATTGGAAATACAAGATAAAGCAAACCAGATGGAAAATAATGTTGAAGGTTCTTGAATTGATGAAAAAATGCCTTGAGTCGATGCCCTGTTATGGAAAGTTGGGAGAGATCATACACAATGTGTTATTCTCTGATTCTTCCATCCACAACACACTCTTCCAAATTGCTTGCACTACTGCCCAAGCCTTGGAGAAACTGCATGTAAGCCGCCTCTTTGATCCAATGGAAATTGAGGGGATACAGCTTGCTATAGGATCTGTCTTGGACATTCTTGTGGTTATGCTGACTAGACTGTCAAAGGATAACTCTTCCAGCTTTCCCGTTTTTCTCCAAGCAGTGTTCTCATGCACAACCAAATCAGTTCCTCTTATCACTTCTGTTACTTCTTTGATTTCATACTTCCGGGATCCTGCCATCCAGTTGGGTGCTGTCAAGTTCATTTCAATGTTATTTGTCACGGCAGATTGTTGTCAACCATTTTCGTATGGAACCACGTTTTTTGCTCCTGATAATGAGGAGATTATGGATTTGAGGCGTTCTGCAAGCTACATACTGCAGGAGCAACTGCTATCAAATGAAGACCTTTTTGTTGCAACACTTAATTTATTCACTTCTGCAGCACGTTACCAGGCTGCTTTTGTTGTTGCTATCTTTGCTCCAGATGCCGGCAATGAAGACCAACATAATACTGGGGATCCAAAGTCGCAAAGTAGTGAAACTTCTCTGGTACCACTAGTATCCAAAAAATCAAGTTTACTAGATGCGCTTATGCTCTACATTGAGAGGGCACGTGATCTGATCAAAAGCAAGCCTCGGATACTGCTTAGTGTACTTAACTTCATGGTCTCCCTGTGGCAAGGGTCTCCTCAATATGCAAATCTCTTAGAAATTTTGAGAAGCTATGGAAAGTTTTGGCGACACTTGGCCGACGCAATCTCAAATGTTTCCAACACTGAGATCCCTTTACTTGAAAGTGTAAAAGAAGAAGATGCTTGCAATCTAGCATACAGTTTCCATTGTCAATCTGCCATTCTCAGAATCATGGCATATGAATTGTTTTTGCAGAAAAAGTTGTTGCATGCAGAGTTACTTGGGAAGGATGAATCTAAGGACAAGGAGAAAAATGCCACAAAATCTGACAAATCTAATTCCACAGATTTTCATGAACTTAAGGGAATCTGGTCTTCATGGTTCAAAGATTCTGTCTTACAAAAACTAATAAAGTCATATACTTGTTGTGGATATAAGAATGATATATATTATGGTGCAAAGGTGGCCACCAATTCATTCTCTGTTCATGTGATGGAAAAATTAGCTGTTGGTGACTCAGGAAGTTTATCTGTGTCATTGCTTCAGAAGATTCATGGAAACCTCATAAAGTTGAGCATGCATCCTGCTTTCTCTGAATTGTTGTCTCAATACTCACAGCGCGGTTACAGTGAGGGAAAAGAACTGAAGAAGTTGATACTCAGTGACCTCTTTTATCATTTACAAGGAGAGCTTGAAGGGAGAAAAATTGGTATTGGACCATTCAAAGAACTATCTCAGTATCTCATTGAATCAAATTTTTTGGGAACCTACCAACACCAGTTCAATGAAGACTCTCTTGTGAAGAATGTATACTTGTTTGACCTGAAACGATTGCGAGCAGATATGAAACTAGATGTTTGGGATTGTTCTCATTGGAGAACATCTAGGGATATTGCAGAAACTATGTTGAGTTTTCTGCAGGATGCAAACTCAATTATGTTGCTGTCAAGTTCAAGGCTTTCTGCATCAAAAGGATTAATAGCTGTTTTGGCTGTTTGCCATGATAATTTGTTAGGGAAGGCTACTAAAGAAGAGGGGATCCCAGATGAACTTGTAATCTCCTGCATAGATAGTATTTGCAAGTCTTTGCTTGCAACAATTGAAACGTTATCACCTGTTCTTGATGCCTCCGAAGATGTATTCAATTTTCTTGCTTCTCAAGTAGAATTGCTTTTCCACTTGATGAGAACTGTCAGAAGGAGCATCCCCTTATCTGCATCTCTACTTGTTTTGAAATGTGCAAGTTCAGGTCTCAAGCTGTTGAGTGAAATTAAGAGGTTGCCTTCTGGGGCTGATGATATCATGGTGCTATTGCTGACATTGCTGCTTTTGGTACTACAGTTCAACTCCCTCAAATCACATTCAGATGGGGTGGCAGATGAGAGTTCTGACGAGAACTTCTCAAAGGTTTCAAATGCAACCCTAGGCCTGCTACCCGTTCTTTGCAATTGCATAACAACTTCAGAGCATGGTATGCTGTCACTGTCTGTTATAGACTTGATATTGAGAAGCTTCTTGATGCCAAGGACTTGGCTACCTATCCTGCAGAGTCATCTTCAGCTGCAGCTTGTTATGCTAAAACTCCAAGATAAAACTTCGCCCTCGATTCCAATGATATTGAAATTCTTTTTAACCGTTGCACGAGTTAGAGGAGGTGCTGAGATGCTTTATAGTTCTGGTTTCTTGTCGTCACTGAGAGTGTTGTTTGCCGAATCTTGTGAGATTTTCTCAAGAAGTGGAAGCCAGAATCCAGTCAGCTCATATGAGAAGTCTGAAACCCCCCAAGACATTTGGGGACTTGGATTAGCTGTGATTACATCTACCCTTCAATCCTTAGGAGACAGTTCTTCCGGAACTGCTATTGTGAACAGCATGATACCTTACTTTTTCTCAGAGAAGGCTCATCTTATTTTTTCTTCTCTAAATGCCCCAGCCCTTCCTTCTGATGATCATGACAAGAAAAGACCTCGGGCACAGAGATCAGGGATTTCTTTTGCCACTCTTAAAGAAACAGAACATACTTTGATGCTCATGTGTGAGCTTGCAAAACATTGGAGTTTATGGATTAAGGCGATAAAAGATGTAGATAGACAGCTCAGAGAGAAATGTATCCATCTTTTAGCCTTTATTAGCAGGGGAACTCAACGTCTTGGTGATTTTTCAAGCCAGAATGCCCCTCTATTGTGTCCACCTACTACGAAAGAGGATTTTGAAATTTTCTTGAACCCTTCATACATCAGTAGTAGAAAAGGATGGTTTGCTCTCTCACCACTTGGATGTGTGCCAAAACAGAAGATCTCTTCCTTGTCAACTGCAATATCTATCTCTGGTGAAGCATCTGAGAGTACTGATCCTTCTCCAAAAACACACTTTTCTGACGCTGTAGCTGTGCAGGTTTATAGAATCACATTTCTTCTATTAAAATTTCTCTGCTTACAAGCCGAGGGTGCTGCTAAAAGGGCTGAGGAGGTTGGCTTTGTTGATCTTGCACATTTTCCTGAGCTTCCTATGCCAGAAATTTTGCATGGACTGCAGGATCAAGCAATTGCTATTGTTACTGAGCTTTGTGATTCCAACAAACTGAGGGCCTCTCGAGACACACAGAACGTTTGCAACTTAATGCTGCAAATTTTTGAAATGGCCTTGCACTTAGAACTTTGTGTTCTACAAATTTGCGGAATAAGACCTGTATTAGGTCGTGTGGATGATTTTTCAAAAGAAGTCAAATCCTTATTCAGTGCAATGGAGGGCCATGCTTTTCTAAAAGCATCTAGCAAGTCTTTAAAACAGATGATATCGTGTGTCTATCCTGGATTGCTGCAGGCGGAGAATTTCATGTGA 4914 0.4145 MWKGVCSFSLNNVQEIDALVSTFSGFEMNEAGPLVLAWAVFLYLLLTLPGKNGTNELMEIDHIGYVRQAFEAGFLRYCLEILECDIFKEYDGPASGYRSVLRTFISAFIASYEVNLQLEDGNPALILDILCKIYHGEESLCTQFWDKESFIDGPVRCLLYNLESEFPVRTLELVRLLSSLCEGTWPAECVYNFLDKSVGVSSLFEISSDSQVDDASHMVEARQAVQVPGVEGFFIPPGTRGRVLKFVGEDTALVRWEYAPSGVFLLLLRLAQDVYLNNKEEVLCTLDLLSRLVVVEIICNLVKNLPLNSCSAALMSMAIKILVTISPANVTTVALNANLFDINLQTAVFSVGNNGFSSGSWLLSSKLARMILTDCEMNSSDCPLAISVLDFTIQLVETGVENDALLALIIFSVQFVLVNHQYWKYKIKQTRWKIMLKVLELMKKCLESMPCYGKLGEIIHNVLFSDSSIHNTLFQIACTTAQALEKLHVSRLFDPMEIEGIQLAIGSVLDILVVMLTRLSKDNSSSFPVFLQAVFSCTTKSVPLITSVTSLISYFRDPAIQLGAVKFISMLFVTADCCQPFSYGTTFFAPDNEEIMDLRRSASYILQEQLLSNEDLFVATLNLFTSAARYQAAFVVAIFAPDAGNEDQHNTGDPKSQSSETSLVPLVSKKSSLLDALMLYIERARDLIKSKPRILLSVLNFMVSLWQGSPQYANLLEILRSYGKFWRHLADAISNVSNTEIPLLESVKEEDACNLAYSFHCQSAILRIMAYELFLQKKLLHAELLGKDESKDKEKNATKSDKSNSTDFHELKGIWSSWFKDSVLQKLIKSYTCCGYKNDIYYGAKVATNSFSVHVMEKLAVGDSGSLSVSLLQKIHGNLIKLSMHPAFSELLSQYSQRGYSEGKELKKLILSDLFYHLQGELEGRKIGIGPFKELSQYLIESNFLGTYQHQFNEDSLVKNVYLFDLKRLRADMKLDVWDCSHWRTSRDIAETMLSFLQDANSIMLLSSSRLSASKGLIAVLAVCHDNLLGKATKEEGIPDELVISCIDSICKSLLATIETLSPVLDASEDVFNFLASQVELLFHLMRTVRRSIPLSASLLVLKCASSGLKLLSEIKRLPSGADDIMVLLLTLLLLVLQFNSLKSHSDGVADESSDENFSKVSNATLGLLPVLCNCITTSEHGMLSLSVIDLILRSFLMPRTWLPILQSHLQLQLVMLKLQDKTSPSIPMILKFFLTVARVRGGAEMLYSSGFLSSLRVLFAESCEIFSRSGSQNPVSSYEKSETPQDIWGLGLAVITSTLQSLGDSSSGTAIVNSMIPYFFSEKAHLIFSSLNAPALPSDDHDKKRPRAQRSGISFATLKETEHTLMLMCELAKHWSLWIKAIKDVDRQLREKCIHLLAFISRGTQRLGDFSSQNAPLLCPPTTKEDFEIFLNPSYISSRKGWFALSPLGCVPKQKISSLSTAISISGEASESTDPSPKTHFSDAVAVQVYRITFLLLKFLCLQAEGAAKRAEEVGFVDLAHFPELPMPEILHGLQDQAIAIVTELCDSNKLRASRDTQNVCNLMLQIFEMALHLELCVLQICGIRPVLGRVDDFSKEVKSLFSAMEGHAFLKASSKSLKQMISCVYPGLLQAENFM* 1638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1101 1637 PANTHER NUCLEOPORIN NUP188 HOMOLOG 6 1630 IPR044840 GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1101 Amo-Chr13 13943716 13958061 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1101 K14311 - gmx:100796560 2427.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1101 13 13943716 13958061 Amo13g1101 13 13943716 13958061 ECH