Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1091 ATGGATAGACAGCAAGTAGTCCTCCACATGAACCATGGCATGGGAGATAATAGCTATGCTCATAACTCTATCGTTCAGCAGGCTCCAAAGGAGTTGGGTAATGAAGAAAATGTACACTTAACAAGCACAACTCCGCCGGCAATGCATGAAGCATATCTTGAACAATTCCAAAAGGACTTTAAACTATTTCTCAAATTACGTTCACAAGAGCTAGTGCCTAAAGGTGGGATGGTTCTCACTCTAATTGGAAGGGACAAAAGTCAGAAAACTCACGATATCAGAACTGCTTGGAGCCTAATTGGCACAACACTCAATGACATGAATTTGATTGAAGCTATAAAATTAGAATCCTTTGATTTGCCATTGTATAACCCAACAATAGAGGAAGCTAAAGAAGTAATTGAGGATGAAGGATCTTTCACCCTTCAAAGGTTGGAATCTGTCATACTGGATTGGAGTACAAACATAAAGGAAGCTGTTGATGATGACAACAATAATAATCTTGATCTAAATACGAAGGCAGAGTTTACAACTAAATTCATTAGAGCTGCATTAGAACCTCTTTTGAAGGCAAAATTTGGAGAAGAAATCATGGACGAGCTTTTTGTGAGATATAAGAATAAGATTGTTCAATTAATAATGGGGGTTAAAATATTGGAATTTCCTACTCTCATAATATCACTGATAAAGAAGATCCGAATTCATAACACAAGCAGTGAACAAGTGATGAGCAGCTTAATTAAGAGAACACGTAATAATTTCACGCAGCAAGTGGTCCTCCACATGAACCATGGCATGGGAGATAATAGCTATGCTCATAACTCTATCATTCAGAAAAAGGTGATGAGGGAGGCAAAAGGCATAGTAGAAGAGAGTATCAAGAGGTTATATACTATTATTCCTATTCATTGTTTTAAGGTGGCTGACTTAGGCTGTTCTTCGGGACCAAATGCTCTTCAAATGGTATCTAATGTCATCGACATTGTTGATACTACTACTTCTAACTTGAATCTCAAACCACCGGTTTTTCAATTCTTCTTGAATGATCTATTTGGGAATGACTTCAATAGCATCTTTAAATCACTCCCTCAATTCTCGGAAATCATAGAAGAAGAGAAGGGACACAAATTGGGTCCATGTTTTATCAATGCAACTCCAGGGACATTCTACAAGAGGCTATTTCCTAACAATTTCTCCCACTTTGTTCATTCCTCTTTTAGTCTTCATTGGCTTTCTCAGGTTCCAAAGAAGTTGTTTAATAAGGAAAATATACATTTAACAAGCACAAGTCCTCCAAGAATGCACAAAGCATATCTTGAACAATTCCAAAACGACTTTAAATTATTTCTGAAATTACGTTCACAAGAGCTGGTGTCAGAAGGTGGGATGAATTTGATCGAAGAGACAAAATTGGAGTCGTTTAATTTACCATTGTATGACCCAACAATAGAGGAAGCTAAAGAAGTAATTGAGGATGAAGGATCTTTCACTCTTCAAAGGCTAGAATCTGTGATAATGGGTTGGGATGGAAACATAAACGAAGGTGTTGATGACAACAATAAACTTGATCTAAATATGAGGGCACAGTTTATAACCAAACAACAAAGAGCTGCTTTAGAACCACTTTTGAAGGCACAATTTGGAGAAAATGTGATGGACGAATTGTTTCTCAGAGAATTCATAACACAAGCAAGCAGTGAACATATGATGAGCACCTTAATTAGCTGGGGGTCAAGAGAACGTACCAAGTGCATTACTACAAAGGAAATAGAAGACATGGAAGTTGGTATGGCATCACAAAATATGCTGCACATGAATAGTGGTGTAGGAGACAAAAGCTATGCACATAACTCTTTCTTTCAAAAAAACGCAATTATCAAGGCAAAACCAATATTAGAAGAAAGTATGACAAGACTCTATTATAATATTCTTCCCAAGTGTTTGAAGGTTGCTGATTTAGGGTGTTCTTCAGGACCAAACACTCTTCAAGTGATATCGAATATCATCAACATTGTTGACACTACTAGCTCCAACTTGAATCTTAGCTTACCTGATTTCCAATTTTATTTGAATGATCTATTCGAAAGTGATTTCAATACTATTTTCAAATCACTCCCTCAATTCTACAAAACATTGGAAGGGAAGAAGGGAAACAAGATTGGTCCATGTTTCATTAATGCAACTCCTGGAACATTCTACAAGAGGCTCTTTCCTACTTCTTCCATGCACTTCTTTCATTGTTCTTATAGTCTACATTGGCTTTCACAGTCTCCAGAGGAGTTGACTATTGATGGAGGTGGAGCAGTGGAAAGAGACAGCATATATTTAACAAGCACAAGCCCAATAGCAATGCAGAAAGCATATCTTGGGCAATTCCAAAGAAACTTGAAAGCATTTCTGAAATCACGTTCAGAAGAATTGGTAACAGGGGGTGAGATGGTTTTGACATTTATTGGAAGGCAAAATAATACTTCTGAAATCAGAGCTACTTGGAACTTATTGGGCCTTGCACTTAATGAAATGCTCTCAGAGAATTTGATTGAAAAGGAAACATTGAAATCCTTCAATATCCCAAATTATGACCCTTCAATGGAAGAAGTTAAAGAAATAATTGAGGAAGAAGGATCTTTCATTCTTCACAGAGTGGAAACTATGTGGATGGGTTGGCATGGCAACATGATGAATAATGAAGAAGGTGCTAATGGCAATCAACTTGATGAGAATGTGACAGGGGAGTTTATAGCTAAATACATTAGAGCTGTTACTGAACCTCTTTTAAAGGCTCATTTTGGACAAAGGATCATGGATGAGTTGTTCCTTAGGTTTAAAGATAAGGTTGCCCAACTTATTAGGGATATTCAAATATTGGAATTTCCAAATTTTATAGTGTCTCTTATTAAAAGTGCTTAA 2910 0.368 MDRQQVVLHMNHGMGDNSYAHNSIVQQAPKELGNEENVHLTSTTPPAMHEAYLEQFQKDFKLFLKLRSQELVPKGGMVLTLIGRDKSQKTHDIRTAWSLIGTTLNDMNLIEAIKLESFDLPLYNPTIEEAKEVIEDEGSFTLQRLESVILDWSTNIKEAVDDDNNNNLDLNTKAEFTTKFIRAALEPLLKAKFGEEIMDELFVRYKNKIVQLIMGVKILEFPTLIISLIKKIRIHNTSSEQVMSSLIKRTRNNFTQQVVLHMNHGMGDNSYAHNSIIQKKVMREAKGIVEESIKRLYTIIPIHCFKVADLGCSSGPNALQMVSNVIDIVDTTTSNLNLKPPVFQFFLNDLFGNDFNSIFKSLPQFSEIIEEEKGHKLGPCFINATPGTFYKRLFPNNFSHFVHSSFSLHWLSQVPKKLFNKENIHLTSTSPPRMHKAYLEQFQNDFKLFLKLRSQELVSEGGMNLIEETKLESFNLPLYDPTIEEAKEVIEDEGSFTLQRLESVIMGWDGNINEGVDDNNKLDLNMRAQFITKQQRAALEPLLKAQFGENVMDELFLREFITQASSEHMMSTLISWGSRERTKCITTKEIEDMEVGMASQNMLHMNSGVGDKSYAHNSFFQKNAIIKAKPILEESMTRLYYNILPKCLKVADLGCSSGPNTLQVISNIINIVDTTSSNLNLSLPDFQFYLNDLFESDFNTIFKSLPQFYKTLEGKKGNKIGPCFINATPGTFYKRLFPTSSMHFFHCSYSLHWLSQSPEELTIDGGGAVERDSIYLTSTSPIAMQKAYLGQFQRNLKAFLKSRSEELVTGGEMVLTFIGRQNNTSEIRATWNLLGLALNEMLSENLIEKETLKSFNIPNYDPSMEEVKEIIEEEGSFILHRVETMWMGWHGNMMNNEEGANGNQLDENVTGEFIAKYIRAVTEPLLKAHFGQRIMDELFLRFKDKVAQLIRDIQILEFPNFIVSLIKSA* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1091 969 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 259 560 IPR029063 -
Amo13g1091 969 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 30 228 IPR005299 GO:0008168
Amo13g1091 969 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 601 965 IPR005299 GO:0008168
Amo13g1091 969 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 465 558 IPR005299 GO:0008168
Amo13g1091 969 PANTHER 7-METHYLXANTHOSINE SYNTHASE-RELATED 258 465 - -
Amo13g1091 969 PANTHER 7-METHYLXANTHOSINE SYNTHASE-RELATED 601 965 - -
Amo13g1091 969 Pfam SAM dependent carboxyl methyltransferase 636 966 IPR005299 GO:0008168
Amo13g1091 969 Pfam SAM dependent carboxyl methyltransferase 293 465 IPR005299 GO:0008168
Amo13g1091 969 Pfam SAM dependent carboxyl methyltransferase 28 229 IPR005299 GO:0008168
Amo13g1091 969 Gene3D - 613 947 IPR042086 -
Amo13g1091 969 PANTHER 7-METHYLXANTHOSINE SYNTHASE-RELATED 30 228 - -
Amo13g1091 969 PANTHER 7-METHYLXANTHOSINE SYNTHASE-RELATED 465 558 - -
Amo13g1091 969 Gene3D Vaccinia Virus protein VP39 617 888 IPR029063 -
Amo13g1091 969 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 7 231 IPR029063 -
Amo13g1091 969 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 597 967 IPR029063 -
Amo13g1091 969 Gene3D Vaccinia Virus protein VP39 17 160 IPR029063 -
Amo13g1091 969 Gene3D Vaccinia Virus protein VP39 280 555 IPR029063 -
Amo13g1091 969 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 258 465 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1091 Amo-Chr13 13818687 13838277 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1091 - K21483 ahf:112789175 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1091 13 13818687 13838277 Amo13g1091 13 13818687 13838277 ECH