Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1052 ATGACCAACAGCTCATCCTCGAAAAAGCACGGTCAAGATCAGCCTGAATTAAGTGGTCCTACCCCCAAATCTCATCGAACCAAAATGGGAAAATCCGAAGACACCGATAAGAAGAACTTAGGTAAGAAGCTCAAAGATGTAGAAATAAGTGTTCCAATAGTGTATGGGAATATTGCATTCTGGCTTGGGAAAAAGGCTAGTGAGTATCAGTCACATAAATGGACTGTGTATGTTCGTGGAGCATCAAATGAGGACCTTGGGGCAATAGTAAAGCGTGCTGTTTTTCAATTGCATTCAAGTTTTAATAATCCCACACGAGTTGTGGAGTCGCCGCCTTTCGAGTTGTCGGAGGCGGGATGGGGTGAATTTGAAATTGTGATCACACTTCATTTCCACAGTGATGTTTGTGACAAACCTTTAAACTTATATCATCACTTGAAATTGTATCCAGAGGATGAAAACAGCTCCATGTCAACAAAGAAGCCTGTTGTCGTGGAGTTATATGATGAGATAGTTTTTCCTGATCCATCGGAGGCTTTTTTGTCCCGTGTGCAAAACCATCCAGCAGTGAARGTGCCGAGATTGCCCCCCGGGGTTACCTTGCCTCCACCAATACCTGTTGAGGATGCAAGTAAAAGAAGGAAAGGCGATACCAAAGATCATCCCTTAAGCCAATGGTTCACAAATTTCTCAGAAGCAGATGAACTCTTGCAGCTTGCAGCAGCTCGTCAGCAGGTTCAAGCTCATATTGCTAAACTCAGACGACAGATTAGTTTGATAGATGGGCAGCATCATCAATACTTCAAATCTTCTTCTGACCAGTAA 825 0.4315 MTNSSSSKKHGQDQPELSGPTPKSHRTKMGKSEDTDKKNLGKKLKDVEISVPIVYGNIAFWLGKKASEYQSHKWTVYVRGASNEDLGAIVKRAVFQLHSSFNNPTRVVESPPFELSEAGWGEFEIVITLHFHSDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVELYDEIVFPDPSEAFLSRVQNHPAVKVPRLPPGVTLPPPIPVEDASKRRKGDTKDHPLSQWFTNFSEADELLQLAAARQQVQAHIAKLRRQISLIDGQHHQYFKSSSDQ* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1052 274 Coils Coil 236 256 - -
Amo13g1052 274 MobiDBLite consensus disorder prediction 194 223 - -
Amo13g1052 274 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 16 267 - -
Amo13g1052 274 MobiDBLite consensus disorder prediction 1 21 - -
Amo13g1052 274 CDD YEATS_TFIID14_like 49 180 - -
Amo13g1052 274 Gene3D YEATS domain 44 196 IPR038704 -
Amo13g1052 274 PANTHER YEATS DOMAIN 16 267 IPR005033 GO:0006355
Amo13g1052 274 ProSiteProfiles YEATS domain profile. 43 187 IPR005033 GO:0006355
Amo13g1052 274 MobiDBLite consensus disorder prediction 1 39 - -
Amo13g1052 274 Pfam YEATS family 71 150 IPR005033 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1052 Amo-Chr13 12682094 12684943 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1052 K11341 - gmx:100790602 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1052 13 12682094 12684943 Amo13g1052 13 12682094 12684943 ECH