Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1016 ATGGGTTTTCTTTTGGCTGGTATCAGAAGAAAGACATCATTTACTGCAAACCAAGCAACTTCCAAAGTTGTGGAAGTCCCGAAAGGCTATCTTGCCATGTATGTTGGCGAGAAGATGAAGCGATTTGTGGTTCCCATTTCTTATTTGAATCAACCTTTATTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGCGGTCTCACTATTCCATGCAGTGAGGATACTTTCTTGGACCTCACATCTCGCTTAAACTGA 276 0.4058 MGFLLAGIRRKTSFTANQATSKVVEVPKGYLAMYVGEKMKRFVVPISYLNQPLFQELLSQAEEEFGYDHPMGGLTIPCSEDTFLDLTSRLN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1016 91 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
Amo13g1016 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 91 - -
Amo13g1016 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1016 Amo-Chr13 12489074 12489416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1016 15 83 Calmodulin-binding Proteins AT3G43120 50.725 1.90e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1016 K14488 - gmx:100806671 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1016 13 12489074 12489416 Amo13g1016 13 12489074 12489416 ECH