Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0993 ATGCGCCACGTGCAAGAGCTACTCCCTCCTCCTCTCCTTCCTGCTAACGCTTCATCTCATGCTCCTTCTCTCTCTTCATCCATGGAACTCAACCTCTGCGTGAACTACCATAACCGTCACGCTTTCAGATTCACCTCTCCTTCCGCTTTCTCTCTCTCCACTCTCCGTTCCGTCCGCACTCACTTCCTCGGTTCCGCCCACACTCTCCGTCCTCCACTACCGCCTCTTCAATCTCGCAAGAAATGCAACAGGTTGGGGCTTCTCCGCCTCCACTCACCGCGCTTCGTCTTCAAGGCTTCTTTGCAATCTCACTCTCTCATCGTCGTTGTCGTCCTCGTCACCTTATCCGCCGTTTCTATCCTCCGATTCACTCTCAATAACCGAAAGAAGTCTCGCAATCAGACACGTGGACATGCAAAATTTGCATTATCGCGACAAGGAAGTAATGTGGGGAACCAGGTCATTGAAAGCCAGATTCTCGGTTTTCCAGAATTTCAAAGGGATAACCCGTTGAGTGAAATTGGAAATCTAACAGATCACAATGCAGAAGATAACCATATTCTCGAGGACAAAGAGTCTCAGCTTCCGTTATTGAAATCTTCATTGGTTCACGAAGCATCCTTCATGACCAACATATCAGAGTCATCTACTCCTGTTCTTGACTCCAGTTTCAATAATAGTAGTTCGAGGGTTTTAGAAGAGTCTATTTTGCCAGATGCTTTCCAATCAACTGTGTTGCAACCTCTAGCTTTTGCTGAAGAAATGGCTTTACAAGTAGAAGAAAATCAAGATCAAGTTGACTCTGATCCTGAGTCACCTTTGACTATAGTTAAATCTGAGCATACCACTTCTTCTGTTGGTATAAACAATGAACTCACAACAATCGATGAACAAACTAAAGAAAACATTGATGCCATCAGCTTTGATGTCCTTTTCGGTGAATCAGCGAGGCAAGAGCTGTACATGTTTTATGAGGATAACAAGTCTACAGTTGGGTCCATGTCACCACTTAGTAGTCTAAAGTCGTTATCTCTTCATGCTTCAACTAATAATGTTAAAGGATTGCCCTCAACAATGAGAAATACCACACTAAAAGGATCAGATATCTCAACAGAAATTTCTCCACAAGGTGCAGAATATATTGAAGGAGTGGTACCAATTTCCAGTCACACAGAAGGCTACACTCCACAAAATGGAAGTAAACACTCGAGGAAAGGTGGCAGAGCTCTGCCTGCCAAAGTTTTTCCCAACAATGGCCACTCAATCAACATGCAATTTGATCAGAAAAGTGATCAAACAAGGGTGGAGGATGATCAGAAGAATGACCATTCAGATTATCTGAGCAGATATAATAAGCTGTTAAAAGCTGCGAGGTTACATGAAAGTTTAGAATTGCTTAAAGATATGGAAACAAAGGGTTTATTAGATATGACCAAGATTTATCATGCAAAGTTTTTTAACGTCTGCAAGAGGAAAAGGGCAGTTAAAGAAGCTTTTGATTACATTAGGCTAATTCCAAATCCAACTTTGAGTACATTTAACATGCTTATGTCAGTGTGTACAAGCTCCCAAGATTCAGAAAGGGCTTTCGAAGTGTTGAAGCTACTGAAAGAATCTCGACTAGAACCTGATTGCAAACTTTATACCACTCTGATTTCCACTTGTGCTAAGAGTGGAAAAGTTGATACAATGTTTGAAATGTTTCACAAGATGGTTAATTCTGGAGTGGAACCCAATGTTCATACCTATGGGGCACTCATTGATGGTTGTGCTAGAGCTGGGCAAATAGCAAAAGCATTTGGTGCTTATGGAATATTGAGGTCCAAGAATGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCATGTGCTCAGTCAGGAGCGGTGGATCGTGCTTTTGATGTTTTAGCAGAAATGGCAGCTGAAATACAACCCATTGACCCAGATCACATAACTATTGGTGCATTGATGAAGGCTTGTGCAAATGCTGGTCAGGTTGAACGGGCACTAGAAGTGTATAAGATGTTACAAAAATATAATTTAAAGGGAACTCCAGAAGTTTACACGATTGCCATTAATTCTTGCAGCCAAACTGGAGATTGGGAATTTGCATGTAGTGTTTACAATGACATGACCCAGAAAGGGGTTCTCCCTGATGAGATGTTTCTGAGTGCACTGATAGATGTTGCTGGACATGCGAAAAAGCTGGATGCTGCCTTTGATGTCCTCAAAGAAGCTCGTAAAGGAGGAATACATATTGGAATGATGTCATATAGCTCGCTAATGGGTGCCTGTAGCAATGCAAGAAATTGGGAAAAGGCATTGGAGCTATATGAATATCTCAAGGCACATAAATTGGTGCGAACAGTTTCAACAGTTAATGCTTTGCTCACTGCGCTTTGTGATGGAAATCAATTTCAGAGGGCTTTGGAAGTTTTATCTGAAATGAAAGGATTGGGATTGTGCCCAAACAGTATCACATTCTCAGTACTGTTAACAGCAAGCGAGAAAAACGATGATATGGAAGCAGCTCAAATGCTTCTTTCTCAAGCCAAAATGGAGGGTGTTGCCCTTAATGAATGTGCCTGCAAAGATATGAGAGGGATTGCTTTGTTGGTGAACCTGTTTTATCTTTCAACTCAGGACGGGCCCAAGACATCACTGGCTTTAGCAGTGTATCGTGAAACACTTGGAGCTGGTGAAAAACCTACAAGTGAAATACTGTCACGACTTCTGGGATGCTTACAACTCCCTTATGATGCATCTGTCAAGAATAGACTAGTTGACAACCTGGGAGTAAGCACTGAATCTTCAAGAAACTCAAACCTTCGCGCATTAGTAGATGGTTTTGGGGAATATGATGTTCGTGCTTTTTCAATACTAGAGGAAGCTGCTTCATATGGAGTTGTTTCATCAGTATCATTCAAAGTGAGTCCTATTGTTGTTGATGCTAAGGACATGCATACGTCTACTGCTGAGGTTTATCTCTTAACTGTTCTGAAAGGTCTCAAGCATCGACTGGCAGCAGGTGCAAGATTATCCAATATAATAATTTTACTGCCGGTAGAGAAAACAAAAGTTTCAACTCAAAAGGGGGAAAAGATGATCAACTTGGCTAACAGAGTTGGCCAGGCAGTTGCAGCTTTATTCAGGAGACTTAAGATTCCTTACCAGGGTCACGAATCGAGTGGGAAGCTTAGAATTAATGGTCTAGCTCTGAAGAAATGGTTTCAGCCGAAACTTGCATCATTCAGTGGGAAACCAGGTGACTGGAGCTCATCCCCATCAAGACTGGGCAAACGCATTAGCCATCAGCAGCGAAGGATTCGAACCGGCAATTTATCTTTGGACTAA 3360 0.422 MRHVQELLPPPLLPANASSHAPSLSSSMELNLCVNYHNRHAFRFTSPSAFSLSTLRSVRTHFLGSAHTLRPPLPPLQSRKKCNRLGLLRLHSPRFVFKASLQSHSLIVVVVLVTLSAVSILRFTLNNRKKSRNQTRGHAKFALSRQGSNVGNQVIESQILGFPEFQRDNPLSEIGNLTDHNAEDNHILEDKESQLPLLKSSLVHEASFMTNISESSTPVLDSSFNNSSSRVLEESILPDAFQSTVLQPLAFAEEMALQVEENQDQVDSDPESPLTIVKSEHTTSSVGINNELTTIDEQTKENIDAISFDVLFGESARQELYMFYEDNKSTVGSMSPLSSLKSLSLHASTNNVKGLPSTMRNTTLKGSDISTEISPQGAEYIEGVVPISSHTEGYTPQNGSKHSRKGGRALPAKVFPNNGHSINMQFDQKSDQTRVEDDQKNDHSDYLSRYNKLLKAARLHESLELLKDMETKGLLDMTKIYHAKFFNVCKRKRAVKEAFDYIRLIPNPTLSTFNMLMSVCTSSQDSERAFEVLKLLKESRLEPDCKLYTTLISTCAKSGKVDTMFEMFHKMVNSGVEPNVHTYGALIDGCARAGQIAKAFGAYGILRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAEIQPIDPDHITIGALMKACANAGQVERALEVYKMLQKYNLKGTPEVYTIAINSCSQTGDWEFACSVYNDMTQKGVLPDEMFLSALIDVAGHAKKLDAAFDVLKEARKGGIHIGMMSYSSLMGACSNARNWEKALELYEYLKAHKLVRTVSTVNALLTALCDGNQFQRALEVLSEMKGLGLCPNSITFSVLLTASEKNDDMEAAQMLLSQAKMEGVALNECACKDMRGIALLVNLFYLSTQDGPKTSLALAVYRETLGAGEKPTSEILSRLLGCLQLPYDASVKNRLVDNLGVSTESSRNSNLRALVDGFGEYDVRAFSILEEAASYGVVSSVSFKVSPIVVDAKDMHTSTAEVYLLTVLKGLKHRLAAGARLSNIIILLPVEKTKVSTQKGEKMINLANRVGQAVAALFRRLKIPYQGHESSGKLRINGLALKKWFQPKLASFSGKPGDWSSSPSRLGKRISHQQRRIRTGNLSLD* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0993 1119 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 544 578 IPR002885 -
Amo13g0993 1119 Gene3D Tetratricopeptide repeat domain 594 756 IPR011990 GO:0005515
Amo13g0993 1119 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 614 644 IPR002885 -
Amo13g0993 1119 MobiDBLite consensus disorder prediction 1086 1107 - -
Amo13g0993 1119 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 509 543 IPR002885 -
Amo13g0993 1119 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 791 825 IPR002885 -
Amo13g0993 1119 TIGRFAM PPR: pentatricopeptide repeat domain 654 684 IPR002885 -
Amo13g0993 1119 TIGRFAM PPR: pentatricopeptide repeat domain 547 580 IPR002885 -
Amo13g0993 1119 TIGRFAM PPR: pentatricopeptide repeat domain 581 614 IPR002885 -
Amo13g0993 1119 TIGRFAM PPR: pentatricopeptide repeat domain 759 790 IPR002885 -
Amo13g0993 1119 TIGRFAM PPR: pentatricopeptide repeat domain 689 722 IPR002885 -
Amo13g0993 1119 TIGRFAM PPR: pentatricopeptide repeat domain 794 826 IPR002885 -
Amo13g0993 1119 TIGRFAM PPR: pentatricopeptide repeat domain 512 545 IPR002885 -
Amo13g0993 1119 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 686 720 IPR002885 -
Amo13g0993 1119 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 579 613 IPR002885 -
Amo13g0993 1119 Coils Coil 836 856 - -
Amo13g0993 1119 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 99 1119 - -
Amo13g0993 1119 Gene3D Tetratricopeptide repeat domain 453 593 IPR011990 GO:0005515
Amo13g0993 1119 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 651 685 IPR002885 -
Amo13g0993 1119 Pfam Pentacotripeptide-repeat region of PRORP 512 650 IPR033443 -
Amo13g0993 1119 Pfam Pentacotripeptide-repeat region of PRORP 659 801 IPR033443 -
Amo13g0993 1119 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 756 790 IPR002885 -
Amo13g0993 1119 Gene3D Tetratricopeptide repeat domain 781 857 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0993 450 861 Glycosyltransferase AT1G05670 24.279 1.82e-32 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0993 - - gmx:100814164 1462.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0993 13 12349024 12357155 Amo13g0993 13 12349024 12357155 ECH