Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0989 ATGGCGATACAAGCACAGTTTTATTGTTCGAGTAACAACAATGATGTATCTCCTTTTTGCAACAATGGTTATTATTGTGATGATGGACTCTTTGATTCATCATCATGTTTTAATCTTCAACAACAACATCATCAGAAAGAACAATTACAATTGCAACAACGTTTGCAACAGTCATACAATGAAGATCAGATGGTTGGTTACGATGATTTTACTAATCTCTTTTATTATGATCCAAAACTCAACAACAATCACCATTCAACACCATCAAAAATTTTACCTACCTTTGCTGCTCAATATGATATACAGAGAGACCAGGTTGATCATTACATCAGATTAGAGAATGCAAAGTTGAGATTTATGCTACAAGAGCAAGATAAACAACAAGTGGCATCATTATTGAAGAAGTTTGAATCTCGATCACTCTCTATGCTGATGGAGAAAGATGAAGAGATAGCACAAGTTTCAATGAAAAGGATAGAATTGGAAAATTATTTAAGAAGACTAGAGGCAGAAAACCAAGCATGGCAAAAAGTAGCACAAGAAAACGAAGCAATGGCATTGTCTTTGCACAAAACATTAGAAGAGATGAAAGAAAAAATGGTAGTGGGAACAAAGGATGAAGAATCATGTTGTGATGAAGCACACTTTGAAGAAGAACATGATAATCTTAATGATAATATCATGATGTTATGTAAAAGTTGTCATTCTAGGATTTCGTGTTATTTATTTCTTCCATGCAGGCACCTTTCTTCATGCAAAGAATGCGAGACATTTCTTGAAGCTTGTCCTGTTTGTGGAATGCAAAAAAAAGGTAGTATAGAGACTTTGATTTTCTAA 837 0.3381 MAIQAQFYCSSNNNDVSPFCNNGYYCDDGLFDSSSCFNLQQQHHQKEQLQLQQRLQQSYNEDQMVGYDDFTNLFYYDPKLNNNHHSTPSKILPTFAAQYDIQRDQVDHYIRLENAKLRFMLQEQDKQQVASLLKKFESRSLSMLMEKDEEIAQVSMKRIELENYLRRLEAENQAWQKVAQENEAMALSLHKTLEEMKEKMVVGTKDEESCCDEAHFEEEHDNLNDNIMMLCKSCHSRISCYLFLPCRHLSSCKECETFLEACPVCGMQKKGSIETLIF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0989 278 Gene3D - 240 275 - -
Amo13g0989 278 PIRSF SBP1_RNase_bind 4 278 IPR017066 -
Amo13g0989 278 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 277 - -
Amo13g0989 278 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 277 IPR017066 -
Amo13g0989 278 Coils Coil 151 185 - -
Amo13g0989 278 ProSiteProfiles Zinc finger RING-type profile. 231 265 IPR001841 -
Amo13g0989 278 Pfam Zinc finger, C3HC4 type (RING finger) 230 268 - -
Amo13g0989 278 Gene3D Death Domain, Fas 120 239 IPR011029 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0989 Amo-Chr13 12329922 12331256 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0989 K19042 - gmx:100789863 232.261