Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0988 ATGGGTGCTCTGGATCACATCTCTGATCTATTCGACTGTTCTCACAGTAGTTCCAAGCTCAAGAAGAAGCGCAAGCAGTTCCAGACGGTAGAGGTGAAAGTGAAGATGGACTGCGAAGGATGCGAGAGGAAGGTGAAGAAATCGGTAGAAGGAATGAAAGGAGTAACGAACGTAGAAGTGGAGAGAAAAGCGAACAAGGTAACCGTTCAAGGCTACGTGGAACCTTCGAAGGTGGTGGCGAGAATCGGTCACAGGACGGGGAAGAGAGCGGAGCTGTGGCCATATGTGCCGTACGACGTGGTGGCGCATCCATACGCTCACGGGGTGTATGATAAGAAAGCACCCGCAGGGTACGTGAGGAACACGGAATTTGTTGACCCCAATGTTTCACAGCTGGCACGTGCCAGCTCAGCAGAAGTCAGGTACACCACCGCCTTCAGTGACGAGAATCCTACCGCATGTGCCGTTATGTAA 474 0.5211 MGALDHISDLFDCSHSSSKLKKKRKQFQTVEVKVKMDCEGCERKVKKSVEGMKGVTNVEVERKANKVTVQGYVEPSKVVARIGHRTGKRAELWPYVPYDVVAHPYAHGVYDKKAPAGYVRNTEFVDPNVSQLARASSAEVRYTTAFSDENPTACAVM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0988 157 CDD HMA 31 91 IPR006121 GO:0046872
Amo13g0988 157 Pfam Heavy-metal-associated domain 32 87 IPR006121 GO:0046872
Amo13g0988 157 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 157 - -
Amo13g0988 157 SUPERFAMILY HMA, heavy metal-associated domain 27 94 IPR036163 GO:0046872
Amo13g0988 157 ProSiteProfiles Heavy-metal-associated domain profile. 36 82 IPR006121 GO:0046872
Amo13g0988 157 Gene3D - 23 91 - -
Amo13g0988 157 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 157 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0988 Amo-Chr13 12308744 12309753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0988 - K10752 gmx:547973 268.085