Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0973 ATGGGTAGCAACAACGAGGACCCAAGCTCTTCCCCATCGCACCCTCTTCTTGAACCTCACTCACCTGACTCACAAGAATCCTTCATTCACATATCATACAACCATGGCCCTCGTTCCTTCAAGGACCTTCCTTTCTTCATCCTCTTTCTCCTCTTCTCTCTTTCCACTTTCGCCTTCGGCATCTTCTCCATCTTCCACAGAAACCCCAACTACCCTGCTTCCCTCTCTTCCTTCTCCTTCAACCCAACCACCCAAACCTGCACCACCTCCACCTCCACCTCCACCACCTACTTCCTCCTCTCCCTCAATTCTACATACTATTCCTCCAATTTTGTTGAGGACTTGACATGGACCCTCGTTATCACCTTCATTCTCAGCATACCCATTTGCTGGCTACTCCTCCTTTTTCTCAAGCATTATACCAAACACCTTGTCTACGCTACTCTCCCCTTCTTCATCGTCATCCCCATCTTCCTCAACGTTTACTGGTTCGTTGTATGCACTGTCAGCTCCACTTGCAGCGATGTTTTCCCCATGGTATACCGCATTCTCGTTCTCGTCTTCCTCTTCCTCGTGATTGGGGTAATCGTGTGGATCCTCGTTGCGAATTGGCACCGTGTTGAGCTCACAATCAGCATAATCGGTGTGGCATCAAACGCGCTTTCTTGGAACCTGGGTTTGTTCGGGGTGCTACCCTGTTTGACCATTGGCCTTTTGCTCTACTATGTTCCCATGGTGGTATTCATGGTTTTTGCCACGTTTAACGGCAAAGTTGTGCCGAAAGGTTTGGAAGGTGATGAAATTGGATGTGTTTGGAAGCAGGATAGTTGGGTGCCGGCTTATTTTGCGCTGGCAATACTCACTATGCTGTGGTCCGCAACGGCGATGGTTGAGGCGCAGGTTTATGTGATCAGTGGGACTATTGCTCACTGGTATTTCTCAAAGGATGATCAAGTTCCAAGAAAGAGTATTACAAATTCTATAAGAAATGCTTTTGGTCCTTCTGTGGGAACCGTATGTTTGTCAGGATTGCTTATGTGTGTTGTCCGAATGGTTCGTTCTGCGGTTGATAGTGCTAGACAAGAAGATGCTCCGGGGATAGTTAACCTGATATTGCGATGCTGTGTGAATGCCTTCCTGGCAGCAGTGGATTTTCTTAATAAGTTTACCATCAACTTTGCCGCAATAACTGGTGAGGCTTACTGCACATCTGCAAGGATGACATATGAACTTCTAAGACGTAATCTTCTGTCTGCTGTTTTTGTGGAGACCATCTCATCTCGCATCCTGGCCGGAATTATCTTTGTCCTGTCGGCAATATACACAATTGTGGTATGTGTTATATTAAAGACCACAACGAGTCTTGGGTCCGATTCATATCTAGTAGCAGCGCTAGCTTGGTTGCTGCTGATCATAGTGCTGGGGTTCTTTGTGCATGTACTAGACATTGTAATCGACTCAATTTATGTCTGCTATGCCATAGACCGTGATAGCGGAGAAGTCTGCAAACAAGATGTCCATGAGGTTTATGTTCACTTGCCCATTAGCAGGAGTAGCAGACAATCTAATGTTGTAACAAGAATTCTAGGTGTGTAA 1596 0.463 MGSNNEDPSSSPSHPLLEPHSPDSQESFIHISYNHGPRSFKDLPFFILFLLFSLSTFAFGIFSIFHRNPNYPASLSSFSFNPTTQTCTTSTSTSTTYFLLSLNSTYYSSNFVEDLTWTLVITFILSIPICWLLLLFLKHYTKHLVYATLPFFIVIPIFLNVYWFVVCTVSSTCSDVFPMVYRILVLVFLFLVIGVIVWILVANWHRVELTISIIGVASNALSWNLGLFGVLPCLTIGLLLYYVPMVVFMVFATFNGKVVPKGLEGDEIGCVWKQDSWVPAYFALAILTMLWSATAMVEAQVYVISGTIAHWYFSKDDQVPRKSITNSIRNAFGPSVGTVCLSGLLMCVVRMVRSAVDSARQEDAPGIVNLILRCCVNAFLAAVDFLNKFTINFAAITGEAYCTSARMTYELLRRNLLSAVFVETISSRILAGIIFVLSAIYTIVVCVILKTTTSLGSDSYLVAALAWLLLIIVLGFFVHVLDIVIDSIYVCYAIDRDSGEVCKQDVHEVYVHLPISRSSRQSNVVTRILGV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0973 531 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 28 511 IPR007603 GO:0022857|GO:0055085
Amo13g0973 531 Pfam Plasma-membrane choline transporter 187 497 IPR007603 GO:0022857|GO:0055085
Amo13g0973 531 MobiDBLite consensus disorder prediction 1 23 - -
Amo13g0973 531 PANTHER CTL-LIKE PROTEIN DDB_G0288717 28 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0973 Amo-Chr13 12093599 12097132 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0973 - - gmx:100801313 709.138