Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0968 ATGGGTCGCCTTGTCCTCTTTCTCAGTATCATCGTCTTCTTCGCATTCTCTTTCTTCTCAGAGGTAGAATCAGCGCGGTTCAGGGTTATTAACAAGTGCCGCCACCCAATATGGCCTGGGCTTCTCTCCGGCGCCACCTCGCCGCCGCTACCGACCACCGGCTTCCTCCTCAACGCCGGAAGATCGAGGACAATCACCATCCCAAGGTCCTGGTCGGGTCGGATTTGGGCGAGGACACTCTGCGGCCAAGACTCCGACGGAAAGTTCTCGTGCGTCACCGCAGACTGCGGCTCCGGCAAGGTGGAGTGTGGTGGCGGGGGAGCAAAGCCGCCGGCAACATTAGCGGAGTTCACTCTCAACGGAGCTGACGGGCTTGACTTCTATGACGTGAGCTTGGTCGACGGTTACAACCTTCCGATGCTGATCGTGGCTCAGGGAGGGACGAGAGGAGGGTGCAGCGCCACCGGGTGCCTGGTGGACTTGAACGGTGCGTGTCCTTCAGATCTGAGAGTGGCGCGTGGGAATGGAACTAAAAGTGGTAGAGGTGGTGGGGTCGCGTGCAGAAGCGCGTGTGAGGCGTTTGGGGACCCAAGGTATTGTTGCAGTGAGGCTTACTCTACGCCTGACACGTGTGGCCCTTCGGCTTACTCGCTTTACTTCAAACACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAAACCAGCACTTACACGTGTGCTTCCGCTAATTACTTAATCATTTTCTGCCCTTTGCCTTACACCAGCCAAAAGGTGCTTGGAGCAAGAAAAGATGGCGTGCCGCTTCCTCTGGTAAACAAAACTATGATGTACTTATCAAGGCCACACTCTGGCAGTTCTTCATCCTCAGGTCCGACCCGAACACAGAGTATTGTAGCTTATGTTGTCGCCATCGCGGTGGCATTTTTCCTCTTCTGCCCTTGTTTACATGCCTTATGA 963 0.5545 MGRLVLFLSIIVFFAFSFFSEVESARFRVINKCRHPIWPGLLSGATSPPLPTTGFLLNAGRSRTITIPRSWSGRIWARTLCGQDSDGKFSCVTADCGSGKVECGGGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAQGGTRGGCSATGCLVDLNGACPSDLRVARGNGTKSGRGGGVACRSACEAFGDPRYCCSEAYSTPDTCGPSAYSLYFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYTSQKVLGARKDGVPLPLVNKTMMYLSRPHSGSSSSSGPTRTQSIVAYVVAIAVAFFLFCPCLHAL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0968 320 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 8 263 - -
Amo13g0968 320 SMART tha2 27 252 IPR001938 -
Amo13g0968 320 ProSiteProfiles Thaumatin family profile. 24 252 IPR001938 -
Amo13g0968 320 CDD TLP-PA 27 251 - -
Amo13g0968 320 Gene3D Thaumatin 25 252 IPR037176 -
Amo13g0968 320 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Amo13g0968 320 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Amo13g0968 320 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Amo13g0968 320 SUPERFAMILY Osmotin, thaumatin-like protein 26 252 IPR037176 -
Amo13g0968 320 Pfam Thaumatin family 31 252 IPR001938 -
Amo13g0968 320 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Amo13g0968 320 PANTHER OS03G0233200 PROTEIN 8 263 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0968 Amo-Chr13 12020356 12023048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0968 8 252 Receptor kinase-like Gene Family AT5G38280 50.000 3.88e-81 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0968 - - gmx:100802252 491.5