Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0966 ATGGCATCGTCATCAGATAAGGTGGTAGAAACAGTAATAGCGGGTAACTACGTAGAAATGGAAAGCGAAGGAGGGAAGGGAAAAGACATGAAAAGCAGGGTATCAAGCCTGTTATGGCACGGCGGTTCAGTGTACGACGCATGGTTCAGCTGCGCATCAAACCAAGTAGCACAAGTGCTTCTAACATTGCCATACTCCTTCTCTCAGCTAGGCATGGCGTCCGGCATAGCATTCCAACTACTGTACGGTTTGCTAGGTAGCTGGACGGCGTACCTGATAAGCATACTGTACGTAGAATACAGAACTCGAAAAGAGAGAGAGAAGGTGAACTTCAGGAACCACGTGATCCAGTGGTTCGAGGTTCTTGATGGACTCCTGGGGAAGCACTGGAGGAACGTGGGTTTGGCGTTTAACTGCACGTTTCTTCTGTTTGGATCTGTTATCCAACTCATCGCCTGTGCCAGCAACATATATTACATCAACGATAATCTTGATAAGAGGACTTGGACTTATATCTTCGGTGCTTGCTGTGCCACCACCGTCTTCATTCCTTCTTTTCATAACTACAGAATCTGGTCTTTCTTGGGTCTTCTTATGACCACTTACACTGCCTGGTATCTCACCGTTGCTTCTCTCCTTCACGGCCAGGTGGAAGGAGTTAAGCATTCCGGTCCGACCAAGTTGGTTTTGTATTTTACGGGGGCCACAAACATTCTCTACACCTTCGGGGGACATGCTGTTACTGTAGAGATAATGCACGCAATGTGGAAGCCACAGAAGTTCAAGAGCATATACTTAGTGGCAACAATATATGTGCTGACATTGACGCTTCCATCGGCGGCAGCAGTGTACTGGGCGTTCGGGGACATGCTTCTGAACCACTCAAACGCATTTGCTCTGCTGCCAAGATCCCCATTCAGGGACATGGCTGTCATTTTGATGCTGATCCACCAGTTCATAACATTTGGGTTTGCATGCACCCCGTTATACTTTGTGTGGGAGAAAGCAATTGGAATGCATGAATGCAAGAGCCTCTGCAAGCGTGCACTAGTGAGGCTGCCTGTTGTCATTCCCATATGGTTCTTGGCCATCATATTCCCCTTCTTTGGCCCCATCAACTCCACCGTTGGATCTCTCCTTGTTAGCTTCACTGTTTACATCATCCCTGCCCTTGCTCACATCTTCACCTTCAAATCCTCCTCTGCCCGTCAGAATGCAGTGGAGCAACCTCCCAAGTTTATGGGAAGATGGGTCGGAACCTATGTCATCAATGTGTTTGTGGTAATCTGGGTGCTAGTAGTAGGCTTTGGATTTGGAGGGTGGGCTAGCATGGTCAACTTCATTCACCAGATTGACACTTTTGGACTCTTCACTAAGTGTTACCAGTGCCCTCCACCACAGCTGCCACATCAGCTCAACGCTACCGCCACTGCCACAGCTGCTGCTCCTTCCCCTCACCACCACTCCCTTCCTCCTCTTCATCATCGTGGTGGTCACTGA 1500 0.488 MASSSDKVVETVIAGNYVEMESEGGKGKDMKSRVSSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMASGIAFQLLYGLLGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLVATIYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFMGRWVGTYVINVFVVIWVLVVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPPPQLPHQLNATATATAAAPSPHHHSLPPLHHRGGH* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0966 499 PANTHER OS05G0424000 PROTEIN-RELATED 4 473 - -
Amo13g0966 499 Pfam Transmembrane amino acid transporter protein 40 433 IPR013057 -
Amo13g0966 499 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 4 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0966 Amo-Chr13 12011382 12013339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0966 3 463 Organic Solute Cotransporters AT2G21050 87.419 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0966 K13946 - gmx:100812002 903.279