Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0924 ATGAAATGTAGCAATCAGCTCACCAGCATGTTGAGGGGCTGGGCTAGGCACATTTCAATCCGTAGATCCTATATAAACCCGCCTACTACTTTCCCGCCATCTACAGAGAGCGAGAGATTCACCCGCCATTTTCATTTCCATTCCCAATTCCAAAAACCAGACATGTCTTCTTCTTCGGCCCCCTCCAAAACCCTAATGGATTTCTTCCAACCACCTTCCAAACGAATCAAAACCACTCCCACTTCACTCTTAATCCCCAACTCCAACGACGCCAATGGCTCCTCCGCCTCACTCTCCGTTGACCAGAAATCACGCGTCGATTACAACAAGCACCTCGCAAAATCCAAGCGCAACCTCAAAATATGCCTGGATAAGGTCTCCAACTCCAAAGGTTTTGTGAAACTGGAGGAGCTGCTGGTGGAGGACACGTGGTTGGAAGCACTCTCTGGTGAGCTCCAGAAACCTTATGCACTGAGCCTCTCAAAGTTTGTTGAATCTGAGATTTGCAATAGCAACATTGATGCTGTGTATCCTCCTTCTCACCTCATCTTCAATGCTCTTAACTCTACCCCTTTCGATAGGGTTAAGGCCGTTATCCTTGGACAGGACCCTTATCATGGACCTGGTCAAGCAATGGGCCTTTCATTCTCAGTCCCTGAGGGTGTGAAAGTTCCTTCCAGTTTGGTAAATATATTTAAGGAACTCAAAGAAGATCTTGGTTGTTCAGTTCCACGTCATGGAAATCTAGAAAAATGGGCTGTACAGGGTGTTCTCTTACTTAATACCGTACTCACAGTCAGGAAACATCAAGCAAACTCTCATGCAAAAAAGGGATGGGAACAATTTACTGATGCTGTTATCAAAACAATCTCACAGAAAAGGGAAGGCGTTGTCTTTCTGTTGTGGGGCAACTCTGCTCGGGAGAAATCTAGGTTAATTGATGCAACAAAACATCATATACTTCAAGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGCTTCTTTGGGTGCAGGCACTTCTCTCGCACAAACCAGCTTCTGGAGAAAAGGGGCATAGATCCCATAGATTGGCAACTATAA 1083 0.4561 MKCSNQLTSMLRGWARHISIRRSYINPPTTFPPSTESERFTRHFHFHSQFQKPDMSSSSAPSKTLMDFFQPPSKRIKTTPTSLLIPNSNDANGSSASLSVDQKSRVDYNKHLAKSKRNLKICLDKVSNSKGFVKLEELLVEDTWLEALSGELQKPYALSLSKFVESEICNSNIDAVYPPSHLIFNALNSTPFDRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELKEDLGCSVPRHGNLEKWAVQGVLLLNTVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHILQAAHPSGLSANRGFFGCRHFSRTNQLLEKRGIDPIDWQL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0924 360 SMART UDG_2 188 348 IPR005122 -
Amo13g0924 360 Pfam Uracil DNA glycosylase superfamily 193 347 IPR005122 -
Amo13g0924 360 ProSitePatterns Uracil-DNA glycosylase signature. 196 205 IPR018085 GO:0006281|GO:0016799
Amo13g0924 360 SUPERFAMILY Uracil-DNA glycosylase-like 138 360 IPR036895 -
Amo13g0924 360 CDD UDG-F1-like 156 358 IPR002043 GO:0004844|GO:0006281|GO:0006284
Amo13g0924 360 Gene3D - 121 360 IPR036895 -
Amo13g0924 360 MobiDBLite consensus disorder prediction 79 98 - -
Amo13g0924 360 SMART UDG_2_a 188 348 - -
Amo13g0924 360 Hamap Uracil-DNA glycosylase [ung]. 141 359 IPR002043 GO:0004844|GO:0006281|GO:0006284
Amo13g0924 360 Coils Coil 358 360 - -
Amo13g0924 360 PANTHER URACIL-DNA GLYCOSYLASE 62 360 IPR002043 GO:0004844|GO:0006281|GO:0006284
Amo13g0924 360 TIGRFAM ung: uracil-DNA glycosylase 142 351 IPR002043 GO:0004844|GO:0006281|GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0924 Amo-Chr13 11351824 11355443 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0924 K03648 - gmx:100818241 484.182