Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0912 ATGATTCTTCGGCCACCTTCTTCTGCGAGCTTCTTCCAGTTCTTGCAGGCTTCTTGTCCCTGCAGCAATGAAGCTGATTCCAAAGCTTTTCTTCTTCCATTCCCCTTCTCATCCAGAAAGCGCAGAAAACGCTTCCTCGCCAATTTCGGTCACCGGAAGTTCCGAAGGCGATGGACTCTTCGCCTTTGCGCCATCCCTCCCGAAGCTTCTAACCGCAATTGGAATCCGGAACTTGTCAACTCCGCCGCAAGAGGCGCCAAAGGTTATGTGTTGAAGCGAGTTTCGAGCGAATTGGAGCAAGGGAACGAGTTCAACCACCACCAAGGGTCGCAACAATCGCAGCAGCATGTTCAGTTGGGTTCCAACTTCACGAATTTCCAGGAGGATCCTCTTGTTGATAAGCTCAGAACGCAATTAGGAGTAATTCACCCGATTCCGTCGCCGCCAATTAACCGCAACGTTGCTGGTTTGTTCGTGTTCTTCTTCTTTGTAGGTGTTGTGTTTGACAAATTGTGGACTTCAAGAAGGAGGAACAATAAGGTTAACAGTGTGGATAGCTTGCGTGGCGTGTGGCCTCAGGTGCCCACCAGCTTCTCCTTGTTTCTGGAGAAGGACCTTCAGAGGAAAGAGTCGGTGGAATGGGTGAACATGGTGTTGGGGAAGTTGTGGAAGGTGTATAGAGGTGGGATAGAGAACTGGATTATTGGATTGCTTCAGCCTGTAATTGATAACTTGAAGAAGCCTGATTATGTGGAGAGGGTTGAGATTAAGCAATTCTCGTTGGGGGATGAGCCGTTGTCGGTTAGGAATGTTGAACGGAGGACTTCTCGTCGGGTGAATGATCTGCAGTACCAGATTGGTCTTAGGTATACTGGTGGAGCTCGCATGCTATTAATGCTTTCTCTAAAGTTTGGCATTATTCCAATTGTTGTGCCTGTTGGTGTTAGAGATTTTGATATTGATGGTGAGCTTTGGGTGAAATTGCGACTAATACCAACAGAACCTTGGGTAGGAGCTGTTCAGTGGGCTTTTGTTTCACTTCCAAAAATCAAGTTCGAATTGTCTCCATTCCGTTTGTTCAACTTGATGGCAATTCCAGTTCTCTCAATGTTTTTGACTAAACTTCTCACGGTAGATTTACCTAGACTATTTGTACGCCCAAAGAAAATTGTTTTGGATTTCCAGAAGGGAAAAGCTGTTGGTCCTGTTGCTGTTAATACTAAATCTGGAGAAGTACAAGAAGGAAACAAGGATTCTGTTGGAGAACTTTCAGTTACTCTTGTGGATGCCCGAAAGCTTTCTTATATCTTCTATGGCAAGACAGATCCTTATGTTGTTCTTAACCTTGGAGATCAAGTCATACGAAGCAAGAAGAACAGTCAAACAACTGTATTTGGGCCCCCTGGAATGCCAATTTGGAATCAGGATTTTCATATGCTTGTCAACAATCCTAAAAAGCAGAAGTTAAGCATCCAAGTAAAGGACTCACTAGGGTTTGCAGATTTGACTATTGGTACAGGAGAAGTTGATTTGAGCTCTCTGAAAGACACTGTTCCTACGGATAGAATTGTTACTTTACAAGGAGGTTGGGGATTTTTGGGAAAGGGTTCTTCCGGGGAGATATTACTACGGTTGACATATAAAGCATATGTGGAGGATGAGGAAGATGACAAGGCTGAGATGGATGCTACTGATATGTATGCATCAGATGATGAATTGTCTGATTTAGATGATGGCATTGTCACTGATGCGATGAATGAAATAGATTCTATGTATGACACAGACAAAGAGTCATTTATGGATGTTTTGGCTGCACTAATTGTAAGTGAAGAATTCCAAGGGATTGTAGCATCTGAAACAGGATTTACCAAAGTTTCGGACAATGTTACAAAGATAGGTTCGAAAGCACCAACTTCGTCATCACCATCACCATCACCATCACCATCACCATCGCCTGTTGCTGGTTCTGAATCAAATCCTTCTACCTCTGATCGTTCTGAAGGCTTTGGAGGTTCAGCCTTGTTCTGGCTTTCTGTGATTACTGGCATAGCATTACTAATTGCTATCAGTATGGAGGGTTCAAGTTTGTTCAATCCTTAA 2100 0.4386 MILRPPSSASFFQFLQASCPCSNEADSKAFLLPFPFSSRKRRKRFLANFGHRKFRRRWTLRLCAIPPEASNRNWNPELVNSAARGAKGYVLKRVSSELEQGNEFNHHQGSQQSQQHVQLGSNFTNFQEDPLVDKLRTQLGVIHPIPSPPINRNVAGLFVFFFFVGVVFDKLWTSRRRNNKVNSVDSLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVQWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTVDLPRLFVRPKKIVLDFQKGKAVGPVAVNTKSGEVQEGNKDSVGELSVTLVDARKLSYIFYGKTDPYVVLNLGDQVIRSKKNSQTTVFGPPGMPIWNQDFHMLVNNPKKQKLSIQVKDSLGFADLTIGTGEVDLSSLKDTVPTDRIVTLQGGWGFLGKGSSGEILLRLTYKAYVEDEEDDKAEMDATDMYASDDELSDLDDGIVTDAMNEIDSMYDTDKESFMDVLAALIVSEEFQGIVASETGFTKVSDNVTKIGSKAPTSSSPSPSPSPSPSPVAGSESNPSTSDRSEGFGGSALFWLSVITGIALLIAISMEGSSLFNP* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0912 699 ProSiteProfiles C2 domain profile. 408 524 IPR000008 -
Amo13g0912 699 CDD C2 423 526 - -
Amo13g0912 699 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 421 549 IPR035892 -
Amo13g0912 699 MobiDBLite consensus disorder prediction 633 667 - -
Amo13g0912 699 Gene3D C2 domain 403 550 IPR035892 -
Amo13g0912 699 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 208 395 IPR031468 GO:0008289
Amo13g0912 699 SMART C2_3c 422 523 IPR000008 -
Amo13g0912 699 Pfam C2 domain 421 521 IPR000008 -
Amo13g0912 699 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 12 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0912 Amo-Chr13 11189665 11194172 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0912 438 558 Acyl Lipid Metabolism Gene Families AT4G13550 32.787 1.76e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0912 - - adu:107477171 1303.12