Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0875 ATGATGATAGATTCAAACCCTCCACTCTTGCACCATTATCAAGCACTTCTAAGGAAATCTGCCAAACTCCAACATGCTAATAATAACAAGAACAATAATAGAACTTTTGAAATTCACAATGATCCTATAGTGGATGAATGTGAGCTTCCACTGATAGACCTTAGTGGTCTTGAAAGTTGTAATGCCACAGAAAGAGTGGCTTGCACTGCAGCAATATGCAAGGCAGCATCAGAATGGGGATTCTTCCAAGTAGTAAACCATGGAATAAGCACTGAGCTACTGAGGAACATGAAGGAAGAGCAAATGAAGTTGTTTAAGGTACCCTTTGACAGGAAGGTCACTTGTGAGATTCTGAACAATCCTTACAGATGGGGAACACCAACAGCTACTCGCTCAAACCAGTTTTCTTGGTCAGAAGCCTTTCACATTCCTCTCACCAAGATTTCTGATGCAGCTTCCTGGGGTGAATTCACTTCTTTAAGGGAAGCAATCAATGAATTTGCACCAGCTATGTTAAAAGTTTCTAGATTATTAGCAAGCATTCTAGCAGAAAACTTGGGCTACCCAAATGATGCAATTGAAAAACTCTGTGATGCAAGCACATGCTTTCTGAGATTAAATCACTATCCATCATGCCCAAAATCCCAAGATGAAATTTTTGGATTAGTACCTCACACTGACAGTGATTTCCTTACAATCCTTTATCAAGATCAAGTTGGTGGCCTCCAACTCATGAAAGATTCCAAATGGGTTGCTGTAAAACCAAATCCAGATGCTCTAATTGTTAACATCGGTGACCTTTTTCAGGCATGGAGCAATGACGTGTACAAAAGTGTGGAGCACAAGGTAGTGGCAAATGACAAAATGGATAGATATTCCATAGCATACTTCCTATGCCCTTCTTACAGTACAATAATAAATGGCTACAGGAAACCTTCTTTATACAGGAAATTCACATTTGGAGAATACAGACACCGAATTCAGGAAGATATCAAGAACATAGGACACAAAATTGGACTATCAAGATTTCTGCTTTAA 1038 0.3931 MMIDSNPPLLHHYQALLRKSAKLQHANNNKNNNRTFEIHNDPIVDECELPLIDLSGLESCNATERVACTAAICKAASEWGFFQVVNHGISTELLRNMKEEQMKLFKVPFDRKVTCEILNNPYRWGTPTATRSNQFSWSEAFHIPLTKISDAASWGEFTSLREAINEFAPAMLKVSRLLASILAENLGYPNDAIEKLCDASTCFLRLNHYPSCPKSQDEIFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVKPNPDALIVNIGDLFQAWSNDVYKSVEHKVVANDKMDRYSIAYFLCPSYSTIINGYRKPSLYRKFTFGEYRHRIQEDIKNIGHKIGLSRFLL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0875 345 SUPERFAMILY Clavaminate synthase-like 42 328 - -
Amo13g0875 345 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 29 336 - -
Amo13g0875 345 Gene3D - 14 333 IPR027443 -
Amo13g0875 345 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 198 300 IPR005123 -
Amo13g0875 345 Pfam 2OG-Fe(II) oxygenase superfamily 203 300 IPR044861 -
Amo13g0875 345 Pfam non-haem dioxygenase in morphine synthesis N-terminal 49 144 IPR026992 -
Amo13g0875 345 PANTHER OS02G0630300 PROTEIN 29 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0875 Amo-Chr13 10825114 10827478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0875 34 323 Glycosyltransferase AT5G59530 29.595 3.03e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0875 - - gmx:100809329 580.867