Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0867 ATGGCGGCATCCATGCTTTCTCTTTCTCCTCTCTTCTTTTTCTTCATCTTGAACTCATCTGCGACTTCTCATTCCAGAGCAACAAATGCTTCTGAGTTCACAATCGTCGAAGCAACCGTTGAGGAAATCCAAGCTGCGTTCTCCCGCAACGACCTAACCTCGAGTCAACTCGTTGACTTCTACCTGCAGCGGATCCAGAAACTCAATCCGATGCTCCGCGCCGTACTGGAAGTGAATCCGGACGCACGCGATCAGGCGGAGCAGGCCGATCGGGAGAGAAGAGGCGGGGAGGTGGTTGGGGCGCTGCATGGGATTCCGGTGATGCTGAAGGATAGCATTGGGAGCCGGGACAAGATGAACACGACGGCAGGGTCGTATGCGCTGCTGGGGTCGAAAGTAGCACGTGACGCGCACGTGACGATGAAGCTGAGGGAGGCTGGTGCGGTGATTATGGGGAAAGCTAGTCTGTCCGAGTGGTACAGTTGTCGGTCTCCGGAAGCGCCGGAAAATTGGTGCGCACGAGGTGGATATGCCACTAATCCTTATGTGGAGGGGGGAAGTACATGCGGATCTAGCTTTGGATCCGCCATTTCAGTGGCCACCAACATGGTTGCAGTTTCTCTGGGGACTGAAACCGATGGCTCCATTATCTGCCCAGCTGACCGCAGCTCAGTTGTGGGGATCAAACCCACCGTTGGACTCACCAGCAGGGCTGGTGTCATACCGATTTCGCCTCGCCAAGATTCAATCGGGCCAATATGCAGGACAGTTGCAGATGCAGTTCATGTTCTTGATGCCATTGTTGGGTTTGATCCCAGAGACTATAATGCTACAAAGTCAGCAGCTATGTTTATACCTCAAGGTGGTTACAAGCAGTTCCTCAGGAAAGAAGGCCTCAAAGGAAAGAAACTTGGTGTTGTTAGGAATCCATTTTTCACTCCTTATAATGGATCCAACGCCATTTCTATCTTTGAGAGCCATCTTAACATTTTCAGGCAAAGAGGTGCGATGGTGATAGATAATTTGGAAATAGAGAATTCAAGCATCATTCTTGACCCTTTCCAAAGTGGTGAAGCATTAGCAATGCTGGCAGAGTTCAAGTCATCCATCAATGAGTACCTGCAAGAACTGGTTTATTCTCCTGTGAGATCGCTGGCTGAGATTATTGAATTCAACATCAAGCACCCTGATTTAGAAAAGACGAATGAGTATGGGCAGGATTTGTTTATTGCATCAGAAATGACAAATGGCATTCCTCCAATCGAGGCATTGGAGATGATGGAGCAATTATCACAAAATGGGTTTGAGAAATTGATGAAGGAGAATGAATTGGATGCATTGGTGACTATTGGATCTGATGCTGCCACGGTTCTAGCAATTGGAGGGTACCCTGCAATCACTGTTCCAGCTGGATATGACAGCAAGGGAATGCCATTTGGAGTGTGTTTTGGAGGGCTAAAGGGAACAGAGCCAAAACTCATTGAGATTGCTTATGGCTTTGAACAAGCTACTAATGCAAGGAAGCCTCCACCTACTTGTCATCTACTTCAAGACACTATTTGA 1563 0.4843 MAASMLSLSPLFFFFILNSSATSHSRATNASEFTIVEATVEEIQAAFSRNDLTSSQLVDFYLQRIQKLNPMLRAVLEVNPDARDQAEQADRERRGGEVVGALHGIPVMLKDSIGSRDKMNTTAGSYALLGSKVARDAHVTMKLREAGAVIMGKASLSEWYSCRSPEAPENWCARGGYATNPYVEGGSTCGSSFGSAISVATNMVAVSLGTETDGSIICPADRSSVVGIKPTVGLTSRAGVIPISPRQDSIGPICRTVADAVHVLDAIVGFDPRDYNATKSAAMFIPQGGYKQFLRKEGLKGKKLGVVRNPFFTPYNGSNAISIFESHLNIFRQRGAMVIDNLEIENSSIILDPFQSGEALAMLAEFKSSINEYLQELVYSPVRSLAEIIEFNIKHPDLEKTNEYGQDLFIASEMTNGIPPIEALEMMEQLSQNGFEKLMKENELDALVTIGSDAATVLAIGGYPAITVPAGYDSKGMPFGVCFGGLKGTEPKLIEIAYGFEQATNARKPPPTCHLLQDTI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0867 520 Pfam Amidase 57 493 IPR023631 -
Amo13g0867 520 PANTHER AMIDASE 22 512 - -
Amo13g0867 520 Gene3D Amidase signature (AS) domain 16 511 IPR036928 -
Amo13g0867 520 SUPERFAMILY Amidase signature (AS) enzymes 33 511 IPR036928 -
Amo13g0867 520 PANTHER C869.01-LIKE PROTEIN, PUTATIVE-RELATED 22 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0867 Amo-Chr13 10749128 10752747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0867 32 281 Acyl Lipid Metabolism Gene Families AT5G07360 35.271 6.13e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0867 K01426 - mnt:21407680 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0867 13 10749128 10752747 Amo13g0867 13 10749128 10752747 ECH