Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0866 ATGGCTACCATAATGTCACTAACTATGTCTATACTCTCATTCATGTTGATCATTCTTTTGACCATATTATCAGAAGGGTCATACACCATAACAGCACAACAATTCTCTATCAAAGAAGCAACCATAAGTGAGATTCAACTTGCATTCAGGCAAAACAAACTCACCTCAAGGAAGCTGGTTGAGTTTTATATAGAAGAAATCAAAAGGCTGAACCCAACTCTTAAGGGTGTCATAGAAGTGAACCCAGATGCATTGTCCCAAGCTGATAAAGCCGACTGCGACCGAAAAACTAAGTCGTCGACAAGTTTGCCTGCACTGCACGGTATTCCAGTTCTGCTCAAGGATAACATTGGAACCAAGGATAAGCTGAATACTACTGCTGGATCTTTTGCTTTGCTTGGTTCTGTGGTGCCTCGTGATGCCGGTGTGGTGTCGAAACTGAGGAGAGCCGGGGCAATCATATTGGGGAAGGCCAGCTTGAGTGAATGGGCTGCCTTCAGGTCTACAAAGGCTCCTAATGGTTTCAGTGCAAGAGGTGGCCAAGGAAAGAATCCATATGTTTTATCTGCTGATCCATGTGGGTCTAGTAGTGGATCAGCAATATCAACAGCTGCTAATTTGGTGACAGTAGCACTTGGAACTGAGACTGATGGGTCAATTTTATGTCCATCAAGTGCCAATTCAGTTGTAGGCATCAAACCAACAGTTGGTCTCACTAGCCGGGATCAAGTCATCCCGGTTTCGCCTAGACAAGATACTGTTGGGGCCATTAGTAGGACAGTATCTGATGCTGTCTTTGTTCTTGATGTAATTTCTGGGATTGATTACAATGATCCAGCAACTACAACTTGGTCTAAGTAYATTCCTCAAGGTGGATTCAAACAATTTCTTAATCAAAATGGGCTCAGAGGGAAGAGACTTGGAATAGTAAGGAACCCATTCTTTGGCCTTTTAGCCTCTGATGTGGTTCAACACTTTGAGAAGCATTTTCAGACCTTAAGACATCAAGGAGCAGTTGTGGTAGATAATCTCCAGATAACCAATATCAATGATATCTTAAATGTGACCAAAAGTGGTGAGGCAGTAGCACTTGCTGCTGAGTTCAAACTATCCTTGAATTCATATCTCAAGAACTTGGAGGTTTCGCCAGAAAAGATCAATGAGTTTGGTCAAGACATCTTCTTGTTAGCCCAAACAACAAATGGAATAGGCGCGACAGAGAAGGCGGCACTGGCCAATCTAGCAAGACTATCAAGAGAAGGCTTTGAGAAATTGATGAGTGATTATAAACTTGATGCATTGGTAACACCTGGTTCAAGTGTTGCACCTGTGCTTGCTATTGGAGGGTTCCCAGGAATAAATGTGCCTGCAGGGTATGATAGTAAGGGTGTCCCATTTGGAATAAACTTTGGTGGTTTGAAAGGATCAGAATCAAAGCTAATTGAGATTGCATATGAATTTGAACAAGCAACTAAAGTCAGAAAGCCCCCTCCAGTTTAA 1500 0.4253 MATIMSLTMSILSFMLIILLTILSEGSYTITAQQFSIKEATISEIQLAFRQNKLTSRKLVEFYIEEIKRLNPTLKGVIEVNPDALSQADKADCDRKTKSSTSLPALHGIPVLLKDNIGTKDKLNTTAGSFALLGSVVPRDAGVVSKLRRAGAIILGKASLSEWAAFRSTKAPNGFSARGGQGKNPYVLSADPCGSSSGSAISTAANLVTVALGTETDGSILCPSSANSVVGIKPTVGLTSRDQVIPVSPRQDTVGAISRTVSDAVFVLDVISGIDYNDPATTTWSKYIPQGGFKQFLNQNGLRGKRLGIVRNPFFGLLASDVVQHFEKHFQTLRHQGAVVVDNLQITNINDILNVTKSGEAVALAAEFKLSLNSYLKNLEVSPEKINEFGQDIFLLAQTTNGIGATEKAALANLARLSREGFEKLMSDYKLDALVTPGSSVAPVLAIGGFPGINVPAGYDSKGVPFGINFGGLKGSESKLIEIAYEFEQATKVRKPPPV* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0866 499 PANTHER C869.01-LIKE PROTEIN, PUTATIVE-RELATED 21 498 - -
Amo13g0866 499 Pfam Amidase 59 444 IPR023631 -
Amo13g0866 499 Gene3D Amidase signature (AS) domain 22 499 IPR036928 -
Amo13g0866 499 PANTHER AMIDASE 21 498 - -
Amo13g0866 499 SUPERFAMILY Amidase signature (AS) enzymes 13 491 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0866 Amo-Chr13 10736377 10738448 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0866 36 499 Acyl Lipid Metabolism Gene Families AT5G64440 25.100 3.32e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0866 K01426 - zju:107427553 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0866 13 10736377 10738448 Amo13g0866 13 10736377 10738448 ECH