Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0856 ATGGGTGATGTGGTTTCCAAACAGATTGAGAGGCGCAGAGCAATTCAAACACAAAAGAAAACTCTAAATGATCTCATGAGATTCGAAGGTGAAGACTATCCAGGTTCTGATTACTTCCTTATAAACAGGAAAACATGGATGCATGATCTCAACCCAGAAAAGCTTCAAATCAAGAAGATAGTTTGGCCTGGAACCCATGATTCTGCAACCGACAAGATTGGAATCCCATTCATCACTCGCCCTTTTGCTCAATGCCAATCTGACTCCATATACGAACAACTTTTGATGGGGACACGCGTTTTAGACATAAGAGTGCAGAAGGATAGAAAGGTATGCCATGGAATTCTAACAACTTACAGTGTAGATATTGTCCTTAATGATATCAAGAAGTTCTTGTCTGAAACCGAATCAGAGATCATAATCCTTGAAGTTAGAACAGAATATGGACATGAAGATCCTCCAGAGTTTGATAAGTATCTAGAGGAAAAACTAGGGGATTACCTTATACCAAATGATGAAAAAGTTTTTGATAAAACCATTGGAGAAGTGCTACCAAGGAGGGTTATTTGTGTTTGGAAGCCAAGAAAATTGCCAAAGCCTGAAGCTGGTAGCATGCTGTGGAGTGAAGGGTATTTGAAGGATAATTGGATCAACACTGATTTGCCAGAAACAAAGTTTGAAAGCAACTTGGATTATTTGAGCAAACAAGAACCTGTGAATACTAGAAAGTACTTTTATAGGGTGGAGAACACGGTTACTCCGGTGCCGGATAACCCCATTGTGTGTGTGAAACCAGTGACTGAAAGGATTCATGCTTTTGCAAGGCTATTCATATCTCAATGTTTCACCAAACAGATTGGTGATAGGTTGCAGATTTTCTCTACAGATTTTATAGATGAGGATTTTGTTGGTGCTTGTGTTGGACTCACATATGCAAGGGTGAAGGGTATTGCATGA 957 0.396 MGDVVSKQIERRRAIQTQKKTLNDLMRFEGEDYPGSDYFLINRKTWMHDLNPEKLQIKKIVWPGTHDSATDKIGIPFITRPFAQCQSDSIYEQLLMGTRVLDIRVQKDRKVCHGILTTYSVDIVLNDIKKFLSETESEIIILEVRTEYGHEDPPEFDKYLEEKLGDYLIPNDEKVFDKTIGEVLPRRVICVWKPRKLPKPEAGSMLWSEGYLKDNWINTDLPETKFESNLDYLSKQEPVNTRKYFYRVENTVTPVPDNPIVCVKPVTERIHAFARLFISQCFTKQIGDRLQIFSTDFIDEDFVGACVGLTYARVKGIA* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0856 318 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 63 185 - -
Amo13g0856 318 SUPERFAMILY PLC-like phosphodiesterases 42 309 IPR017946 GO:0006629|GO:0008081
Amo13g0856 318 SMART plcx_3 48 193 IPR000909 -
Amo13g0856 318 PANTHER UNCHARACTERIZED 7 315 - -
Amo13g0856 318 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 7 315 - -
Amo13g0856 318 Pfam Phosphatidylinositol-specific phospholipase C, X domain 82 174 IPR000909 -
Amo13g0856 318 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 309 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0856 Amo-Chr13 10681802 10682758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0856 1 318 Acyl Lipid Metabolism Gene Families AT4G38690 68.239 3.49e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0856 - - gmx:100789013 511.146