Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0813 ATGGCTGAGGCCGAAGTAGCAGCAGCTCCAACTCACAATGAATTTGAGCCTCATCAAAAGAAGCCATCAAGGAACAAATATGCCTTAGCTTGTGCTATGCTTGCTTCCATGACTTCCATCCTCCTTGGTTACGATATTGGTGTGATGAGTGGAGCAGCTATGTACATAAAGCGAGATCTGAGAATTTCGGATGTGAAGATTGAAATCCTTGCCGGTATAATAAACTTGTACTCTCCAATAGGTTCATACATAGCTGGAAGAACCTCTGATTGGATTGGTCGCCGTTACACTATTATATTGGCCGCCGTAATTTTCTTCGTCGGAGCAATTCTGATGGGATTTTCACCAAACTATGCTTTCCTAATGTTCGGCCGGTTTGTCGCCGGCATAGGAATCGGTTTTGCTTTCCTCATTGCACCCGTTTACACCTCAGAAATCTCTCCTACTTCTTCCCGTGGTTTCCTCTCTTCCTTGCCTGAGGTGTTTTTGAACGGAGGAATATTGCTTGGATACATCTCAAACTATGCATTTTCAAAGCTTTCACTTCGAATGGGTTGGCGGTTGATGCTAGGAGTAGGAGCGATTCCTTCAATGTTCCTAGCCGTGGCGGTTTTAGCCATGCCGGAATCACCAAGGTGGCTCGTTTCTCAAGGACGAATAGGCGAAGCCAGAAAGATCCTCAACAAAATCTCCGACTCCAAACAAGAGGCGCACCAAAGACTAGCAGACATCAAAGACACAGCAGGAATACCCCAGGAGTGCAACGACGACGTCGTTCCCATTACAAAGAAGAAGCAAGGCAAGGGTGTATGGAAGGAGCTTCTCCTTTATCCTACACCCGCGGTGCGCCACATCTTCATCGCTTCCTTAGGGATTCACTTCTTTGCGCAAGCTACCGGCATAGACGCCGTCGTTTTGTACAGCCCTAGAATCTTTGAGAAGGCTGGGATCAAATCTGATAATAAAAAGCTTCTCGCAACCGTAGCCGTTGGATTCGTCAAAACGATTTTCATCTTAGTGGCCACTTTTTTCCTGGATCGTGTTGGAAGACGCAAGTTGCTGTTAAGCAGCGTTAGCGGTTTGATAATCTCGCTTCTAACCCTTGCGGTGAGTCTCACCGTAGTGAATCGTTCGAAGACGACGCTGAACTGGGCCATTGGGCTTAGCATAGCCTCGGTTTTGTCCTATGTGGGCTCGTTCTCGATTGGGTCTGGGCCCATTACGTGGGTTTATAGTTCGGAGATATTTCCGTTGAGGCTGCGCGCTCAGGGTGTAGCTATTGGAGCTGTGGTGAATAGGGTCACCAGTGGAGTGATCTCAATGACCTTTTTGTCCCTCACGAAGGCAATTACCACTGGTGGGGCTTTCTTTCTCTTTGCTGGAATTGCAGCTGCTGCGTGGGTATTTCACTATACTCTGCTCCCTGAAACGCGCGGTAAAACTCTTGAAGAAATTGAAGGATCTTTCGGTAATTTCTGCAGAAAATCTAAGAATAGTGCTAACGGGGAGGGACTTAGCCGTAATAGCACTGGTAACGGCCAGATCCAATTGGGGACCAACGGCCAGAACCAGCCTTTGACAAGTGTGGATTAA 1593 0.4752 MAEAEVAAAPTHNEFEPHQKKPSRNKYALACAMLASMTSILLGYDIGVMSGAAMYIKRDLRISDVKIEILAGIINLYSPIGSYIAGRTSDWIGRRYTIILAAVIFFVGAILMGFSPNYAFLMFGRFVAGIGIGFAFLIAPVYTSEISPTSSRGFLSSLPEVFLNGGILLGYISNYAFSKLSLRMGWRLMLGVGAIPSMFLAVAVLAMPESPRWLVSQGRIGEARKILNKISDSKQEAHQRLADIKDTAGIPQECNDDVVPITKKKQGKGVWKELLLYPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDNKKLLATVAVGFVKTIFILVATFFLDRVGRRKLLLSSVSGLIISLLTLAVSLTVVNRSKTTLNWAIGLSIASVLSYVGSFSIGSGPITWVYSSEIFPLRLRAQGVAIGAVVNRVTSGVISMTFLSLTKAITTGGAFFLFAGIAAAAWVFHYTLLPETRGKTLEEIEGSFGNFCRKSKNSANGEGLSRNSTGNGQIQLGTNGQNQPLTSVD* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0813 530 Pfam Sugar (and other) transporter 32 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo13g0813 530 MobiDBLite consensus disorder prediction 1 20 - -
Amo13g0813 530 TIGRFAM SP: MFS transporter, sugar porter (SP) family 19 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0813 530 Gene3D MFS general substrate transporter like domains 21 491 IPR036259 -
Amo13g0813 530 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo13g0813 530 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 15 507 IPR045262 GO:0015144
Amo13g0813 530 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0813 530 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0813 530 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0813 530 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0813 530 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g0813 530 CDD MFS_PLT 34 485 IPR044776 GO:0005351
Amo13g0813 530 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 15 507 - -
Amo13g0813 530 MobiDBLite consensus disorder prediction 499 530 - -
Amo13g0813 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 478 IPR020846 GO:0022857
Amo13g0813 530 SUPERFAMILY MFS general substrate transporter 12 486 IPR036259 -
Amo13g0813 530 ProSitePatterns Sugar transport proteins signature 2. 127 152 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0813 Amo-Chr13 10118265 10121129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0813 3 522 Organic Solute Cotransporters AT3G18830 63.308 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0813 - - gmx:100816478 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0813 13 10118265 10121129 Amo13g0813 13 10118265 10121129 ECH