Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0800 ATGGCACTGAAACTTTCATTGCCTCTGCCTCGTACTATTCGCACCCCTTCCCTCAGAAACCCCAACCTAATTTCACTTCCTTCATCACTCTCAGCTCGCAACTACAACGCTGCTCTTCCTTCGAAATCGTTCCATGCGGCGTCAATACGACGTCGCTTTGGGTTCCGACCGGCTCGTGTGGCTCAGGGACAAGAGCTCAGTGGTAGTTCCGAAGATAACGATGGAATGGTGGTGGCGGTGGAAGAAGAGGGTGAGAAGAAGGAGCTTGCAGATCAGGGTATATGGAGCCAGGTGAAGGAGATTGTGATGTTTACTGGGCCTGCTACTGGACTTTGGTTGTGTGGGCCCATCATGAGCCTCATGGATACTGCTGTTATTGGTCACGGTAGCTCAATTGAGCTTGCTGCCTTAGGTCCTGCCACGGTTGTGTGTGATTACATGAGCTACATGTTCATGTTCCTCTCTATTGCTACCTCCAATATGGTTGCAACTGCCCTTGCTAACCAGGATAGAGAAGAAGTTCAGCATCACATATCTGTCTTACTTTTTGTTGGCTTAGCCTGCGGCATCTCGATGCTTTTGTTCACAAAGGTGTTTGGTGCAGCAATACTCACCGCTTTTACTGGACCAAAGAATGCACATGTAGTACCTGCTGCTAATACTTATGTTCAGATTCGAAGCTTGGCATGGCCTGCTTTACTTTCTGGATGGGTTGCTCAGAGTGCAAGTCTTGGCATGAAGGATTCCTGGGGACCTTTGAAGTCTTTGGCAGCTGCCACCGTTATAAATGGAATTGGTCTTGTAGTTCTGTGCCGCATCTTAGGATATGGTATTGCAGGGGCTGCATGGGCTGCAATGATATCTCAAGTATTTTCTGCATATATGATGATTCAAAATCTAAACAAGAAAGGATSCGATGCACTTGCTTTATCCATTCCTTCAGGGAAAGAATTTCTGAATATACTTGGTCTTGCTGCTCCTGTATTTTTAACACTGATGTCAAAGGTGGCTTTCTACTCGCTGCTTATATATAATGCTACTTCAATGGGTACCCATACAATGGCCGCTCACCAAGTTATGGTTCAAATCTACATGACATGTACAGTTTGGGGCGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGGGTTGATATATGGARTAAATCGGAATTTGGCAAAGGCCTGGTTGCTTCTAAGGTCTCTTGTAAGTATTGGAGCTATACTTGGATTGTTGTTGGGGATTGTTGGAACATCTATTCCTTGGTTATTCCCTTATCTTTTTACACCTGATCAGATGGTCATCCAAGGGATGCATAAAGTGCTGATACCGTATTTCATAGCGCTATCTGTGACACCACCTACTGTATGCTTGGAAGGAACATTGTTGGCTGGACGGGATCTAAGATTCATAAGCTTGTCAATGAGTGGATGCTTTTGTCTTGGTGCACTAGTGCTATCAGTCTTAAGCAGTAGATTTGGTTTGCAAGGCTGTTGGTTTGCCCTTGCCGGATTTCAGTGGGCTCGGTTTTCAATTGCCCTTTTGCGCCTTCTCTCTCCCAGTAGCGTTCTGTCCTCAGAAGATTTAAGCCAACATGAGCTGCAAAAGTTGAAGGCTACCTAG 1626 0.4563 MALKLSLPLPRTIRTPSLRNPNLISLPSSLSARNYNAALPSKSFHAASIRRRFGFRPARVAQGQELSGSSEDNDGMVVAVEEEGEKKELADQGIWSQVKEIVMFTGPATGLWLCGPIMSLMDTAVIGHGSSIELAALGPATVVCDYMSYMFMFLSIATSNMVATALANQDREEVQHHISVLLFVGLACGISMLLFTKVFGAAILTAFTGPKNAHVVPAANTYVQIRSLAWPALLSGWVAQSASLGMKDSWGPLKSLAAATVINGIGLVVLCRILGYGIAGAAWAAMISQVFSAYMMIQNLNKKGXDALALSIPSGKEFLNILGLAAPVFLTLMSKVAFYSLLIYNATSMGTHTMAAHQVMVQIYMTCTVWGEPLSQTAQSFMPGLIYGXNRNLAKAWLLLRSLVSIGAILGLLLGIVGTSIPWLFPYLFTPDQMVIQGMHKVLIPYFIALSVTPPTVCLEGTLLAGRDLRFISLSMSGCFCLGALVLSVLSSRFGLQGCWFALAGFQWARFSIALLRLLSPSSVLSSEDLSQHELQKLKAT* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0800 541 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 69 530 IPR044644 -
Amo13g0800 541 Pfam MatE 116 263 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo13g0800 541 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 69 530 - -
Amo13g0800 541 CDD MATE_DinF_like 99 511 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0800 Amo-Chr13 9947508 9951858 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0800 K03327 - gmx:100778835 716.457